Hb_003861_030

Information

Type -
Description -
Location Contig3861: 41331-43808
Sequence    

Annotation

kegg
ID rcu:RCOM_0175450
description hypothetical protein
nr
ID KDP44488.1
description hypothetical protein JCGZ_16321 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LB68
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16321 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003861_030 0.0 - - hypothetical protein JCGZ_16321 [Jatropha curcas]
2 Hb_001762_050 0.2137034467 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
3 Hb_183719_010 0.2287707483 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
4 Hb_002701_230 0.2428574696 - - PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
5 Hb_000367_240 0.2464122721 - - hypothetical protein JCGZ_11682 [Jatropha curcas]
6 Hb_011360_130 0.2605100349 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001279_050 0.2611784478 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
8 Hb_007894_100 0.2616165337 - - PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
9 Hb_000069_400 0.265766528 - - RING-H2 finger protein ATL3K, putative [Ricinus communis]
10 Hb_000170_080 0.2725237225 - - PREDICTED: probable calcium-binding protein CML44 [Jatropha curcas]
11 Hb_012092_100 0.2728144788 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000748_100 0.274208726 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
13 Hb_028639_040 0.2747613353 - - PREDICTED: uncharacterized protein LOC105761689 [Gossypium raimondii]
14 Hb_008406_100 0.2749906237 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
15 Hb_005276_030 0.2786042602 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
16 Hb_034310_010 0.2790638792 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
17 Hb_000362_140 0.2845860071 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
18 Hb_000345_410 0.2846788901 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
19 Hb_028487_120 0.2879047273 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
20 Hb_002304_010 0.2887484784 - - protein phosphatase 2c, putative [Ricinus communis]

Gene co-expression network

sample Hb_003861_030 Hb_003861_030 Hb_001762_050 Hb_001762_050 Hb_003861_030--Hb_001762_050 Hb_183719_010 Hb_183719_010 Hb_003861_030--Hb_183719_010 Hb_002701_230 Hb_002701_230 Hb_003861_030--Hb_002701_230 Hb_000367_240 Hb_000367_240 Hb_003861_030--Hb_000367_240 Hb_011360_130 Hb_011360_130 Hb_003861_030--Hb_011360_130 Hb_001279_050 Hb_001279_050 Hb_003861_030--Hb_001279_050 Hb_001762_050--Hb_183719_010 Hb_007894_100 Hb_007894_100 Hb_001762_050--Hb_007894_100 Hb_034310_010 Hb_034310_010 Hb_001762_050--Hb_034310_010 Hb_028639_040 Hb_028639_040 Hb_001762_050--Hb_028639_040 Hb_005332_130 Hb_005332_130 Hb_001762_050--Hb_005332_130 Hb_004449_160 Hb_004449_160 Hb_183719_010--Hb_004449_160 Hb_000164_030 Hb_000164_030 Hb_183719_010--Hb_000164_030 Hb_183719_010--Hb_007894_100 Hb_064971_010 Hb_064971_010 Hb_183719_010--Hb_064971_010 Hb_000739_250 Hb_000739_250 Hb_183719_010--Hb_000739_250 Hb_006142_020 Hb_006142_020 Hb_183719_010--Hb_006142_020 Hb_000020_040 Hb_000020_040 Hb_002701_230--Hb_000020_040 Hb_000020_080 Hb_000020_080 Hb_002701_230--Hb_000020_080 Hb_002232_310 Hb_002232_310 Hb_002701_230--Hb_002232_310 Hb_000230_190 Hb_000230_190 Hb_002701_230--Hb_000230_190 Hb_001755_040 Hb_001755_040 Hb_002701_230--Hb_001755_040 Hb_012753_150 Hb_012753_150 Hb_002701_230--Hb_012753_150 Hb_000367_240--Hb_011360_130 Hb_000748_100 Hb_000748_100 Hb_000367_240--Hb_000748_100 Hb_000367_240--Hb_001279_050 Hb_114292_010 Hb_114292_010 Hb_000367_240--Hb_114292_010 Hb_001454_180 Hb_001454_180 Hb_000367_240--Hb_001454_180 Hb_000347_160 Hb_000347_160 Hb_000367_240--Hb_000347_160 Hb_014497_070 Hb_014497_070 Hb_011360_130--Hb_014497_070 Hb_001501_070 Hb_001501_070 Hb_011360_130--Hb_001501_070 Hb_008406_100 Hb_008406_100 Hb_011360_130--Hb_008406_100 Hb_000441_210 Hb_000441_210 Hb_011360_130--Hb_000441_210 Hb_001478_020 Hb_001478_020 Hb_011360_130--Hb_001478_020 Hb_028487_120 Hb_028487_120 Hb_001279_050--Hb_028487_120 Hb_001279_050--Hb_000748_100 Hb_002307_040 Hb_002307_040 Hb_001279_050--Hb_002307_040 Hb_000069_400 Hb_000069_400 Hb_001279_050--Hb_000069_400 Hb_002221_010 Hb_002221_010 Hb_001279_050--Hb_002221_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0748035 0.0346628 0.39702 0.0849868 0 0.0174047
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0309912 0.00648448 0

CAGE analysis