Hb_003861_090

Information

Type -
Description -
Location Contig3861: 102422-104462
Sequence    

Annotation

kegg
ID rcu:RCOM_0834620
description adenylsulfate kinase, putative (EC:1.3.1.74)
nr
ID XP_002532415.1
description adenylsulfate kinase, putative [Ricinus communis]
swissprot
ID Q43295
description Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=APK1 PE=1 SV=1
trembl
ID B9T2E6
description Adenylyl-sulfate kinase OS=Ricinus communis GN=RCOM_0834620 PE=3 SV=1
Gene Ontology
ID GO:0004020
description adenylyl-sulfate kinase 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003861_090 0.0 - - adenylsulfate kinase, putative [Ricinus communis]
2 Hb_000373_060 0.0314374551 - - PREDICTED: extensin-3 [Camelina sativa]
3 Hb_116190_010 0.0578603454 - - PREDICTED: uncharacterized protein LOC105118535 [Populus euphratica]
4 Hb_006499_020 0.0951026977 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
5 Hb_003858_080 0.1040931028 - - Germin-like protein 2 [Theobroma cacao]
6 Hb_000226_110 0.1127773482 - - -
7 Hb_010334_050 0.1208093266 - - conserved hypothetical protein [Ricinus communis]
8 Hb_060152_010 0.1308509368 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
9 Hb_168561_010 0.1342361838 - - PREDICTED: notchless protein homolog [Jatropha curcas]
10 Hb_000751_060 0.1365153725 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
11 Hb_001675_040 0.1373691678 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001369_270 0.1411914428 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_000645_250 0.1429767383 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
14 Hb_015978_010 0.1552687217 - - PREDICTED: probable beta-D-xylosidase 2 [Populus euphratica]
15 Hb_000000_200 0.1614398969 - - PREDICTED: protein TRANSPARENT TESTA 12 [Jatropha curcas]
16 Hb_168319_060 0.1633829578 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
17 Hb_011849_020 0.168943904 - - dioxygenase family protein [Populus trichocarpa]
18 Hb_000254_060 0.1699009873 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001916_030 0.1718599242 - - PREDICTED: uncharacterized protein LOC105802975 [Gossypium raimondii]
20 Hb_032223_020 0.1736711495 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003861_090 Hb_003861_090 Hb_000373_060 Hb_000373_060 Hb_003861_090--Hb_000373_060 Hb_116190_010 Hb_116190_010 Hb_003861_090--Hb_116190_010 Hb_006499_020 Hb_006499_020 Hb_003861_090--Hb_006499_020 Hb_003858_080 Hb_003858_080 Hb_003861_090--Hb_003858_080 Hb_000226_110 Hb_000226_110 Hb_003861_090--Hb_000226_110 Hb_010334_050 Hb_010334_050 Hb_003861_090--Hb_010334_050 Hb_000373_060--Hb_116190_010 Hb_000373_060--Hb_010334_050 Hb_000373_060--Hb_006499_020 Hb_000373_060--Hb_000226_110 Hb_000645_250 Hb_000645_250 Hb_000373_060--Hb_000645_250 Hb_116190_010--Hb_006499_020 Hb_116190_010--Hb_010334_050 Hb_116190_010--Hb_000226_110 Hb_168561_010 Hb_168561_010 Hb_116190_010--Hb_168561_010 Hb_006499_020--Hb_168561_010 Hb_006499_020--Hb_000226_110 Hb_000639_010 Hb_000639_010 Hb_006499_020--Hb_000639_010 Hb_001675_040 Hb_001675_040 Hb_003858_080--Hb_001675_040 Hb_001369_270 Hb_001369_270 Hb_003858_080--Hb_001369_270 Hb_003858_080--Hb_006499_020 Hb_003858_080--Hb_000373_060 Hb_003858_080--Hb_168561_010 Hb_026419_010 Hb_026419_010 Hb_000226_110--Hb_026419_010 Hb_000226_110--Hb_001369_270 Hb_000000_200 Hb_000000_200 Hb_010334_050--Hb_000000_200 Hb_000609_020 Hb_000609_020 Hb_010334_050--Hb_000609_020 Hb_008376_020 Hb_008376_020 Hb_010334_050--Hb_008376_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0416971 0.113576 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.133749 0.0958055

CAGE analysis