Hb_003864_020

Information

Type -
Description -
Location Contig3864: 12782-17736
Sequence    

Annotation

kegg
ID rcu:RCOM_1037450
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002513972.1
description kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJQ3
description Kinase, putative OS=Ricinus communis GN=RCOM_1037450 PE=4 SV=1
Gene Ontology
ID GO:0004672
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38851: 12712-13113
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003864_020 0.0 - - kinase, putative [Ricinus communis]
2 Hb_001897_030 0.1171913474 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
3 Hb_005389_090 0.1277718451 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
4 Hb_001189_150 0.130288214 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
5 Hb_000991_110 0.133667193 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
6 Hb_010142_040 0.1398062236 - - PREDICTED: classical arabinogalactan protein 4-like [Jatropha curcas]
7 Hb_001832_070 0.1424104986 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
8 Hb_006573_060 0.1458662701 - - hypothetical protein [Bruguiera gymnorhiza]
9 Hb_001568_120 0.1484644325 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
10 Hb_001405_060 0.1497325164 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
11 Hb_024357_010 0.1503986547 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
12 Hb_001213_140 0.150827971 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
13 Hb_013607_010 0.1513853099 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA3 [Jatropha curcas]
14 Hb_005282_010 0.1533918966 - - PREDICTED: probable xyloglucan glycosyltransferase 12 [Populus euphratica]
15 Hb_096930_010 0.1541394718 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
16 Hb_000777_020 0.1560732798 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
17 Hb_012395_260 0.1563921263 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA13 isoform X1 [Jatropha curcas]
18 Hb_000827_090 0.1619344259 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
19 Hb_000252_190 0.1627212292 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
20 Hb_004586_230 0.1630526395 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003864_020 Hb_003864_020 Hb_001897_030 Hb_001897_030 Hb_003864_020--Hb_001897_030 Hb_005389_090 Hb_005389_090 Hb_003864_020--Hb_005389_090 Hb_001189_150 Hb_001189_150 Hb_003864_020--Hb_001189_150 Hb_000991_110 Hb_000991_110 Hb_003864_020--Hb_000991_110 Hb_010142_040 Hb_010142_040 Hb_003864_020--Hb_010142_040 Hb_001832_070 Hb_001832_070 Hb_003864_020--Hb_001832_070 Hb_001897_030--Hb_005389_090 Hb_132517_010 Hb_132517_010 Hb_001897_030--Hb_132517_010 Hb_001897_030--Hb_000991_110 Hb_000509_040 Hb_000509_040 Hb_001897_030--Hb_000509_040 Hb_005396_110 Hb_005396_110 Hb_001897_030--Hb_005396_110 Hb_087468_010 Hb_087468_010 Hb_001897_030--Hb_087468_010 Hb_005389_090--Hb_132517_010 Hb_006573_060 Hb_006573_060 Hb_005389_090--Hb_006573_060 Hb_005389_090--Hb_000991_110 Hb_007313_050 Hb_007313_050 Hb_005389_090--Hb_007313_050 Hb_005389_090--Hb_005396_110 Hb_001189_150--Hb_001832_070 Hb_000521_100 Hb_000521_100 Hb_001189_150--Hb_000521_100 Hb_012272_010 Hb_012272_010 Hb_001189_150--Hb_012272_010 Hb_003633_150 Hb_003633_150 Hb_001189_150--Hb_003633_150 Hb_000836_220 Hb_000836_220 Hb_001189_150--Hb_000836_220 Hb_000991_110--Hb_006573_060 Hb_000723_060 Hb_000723_060 Hb_000991_110--Hb_000723_060 Hb_002049_030 Hb_002049_030 Hb_000991_110--Hb_002049_030 Hb_000991_110--Hb_007313_050 Hb_000827_090 Hb_000827_090 Hb_010142_040--Hb_000827_090 Hb_032920_040 Hb_032920_040 Hb_010142_040--Hb_032920_040 Hb_001213_140 Hb_001213_140 Hb_010142_040--Hb_001213_140 Hb_000777_020 Hb_000777_020 Hb_010142_040--Hb_000777_020 Hb_027905_010 Hb_027905_010 Hb_010142_040--Hb_027905_010 Hb_000221_280 Hb_000221_280 Hb_010142_040--Hb_000221_280 Hb_001832_070--Hb_000836_220 Hb_000186_320 Hb_000186_320 Hb_001832_070--Hb_000186_320 Hb_096930_010 Hb_096930_010 Hb_001832_070--Hb_096930_010 Hb_001198_160 Hb_001198_160 Hb_001832_070--Hb_001198_160 Hb_000028_330 Hb_000028_330 Hb_001832_070--Hb_000028_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0337452 1.31718 0.36023 0.865779 0 0.0131939
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0342811 0 0 0.140106 0.0562201

CAGE analysis