Hb_003937_010

Information

Type -
Description -
Location Contig3937: 7210-8514
Sequence    

Annotation

kegg
ID rcu:RCOM_1590900
description hypothetical protein
nr
ID KDP43920.1
description hypothetical protein JCGZ_20930 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LH55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20930 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003937_010 0.0 - - hypothetical protein JCGZ_20930 [Jatropha curcas]
2 Hb_006618_110 0.062275541 - - -
3 Hb_004994_030 0.0656699639 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
4 Hb_063405_010 0.0678199476 - - PREDICTED: probable terpene synthase 3 [Jatropha curcas]
5 Hb_000155_020 0.0739363555 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_001014_240 0.0749371531 - - PREDICTED: protein NRT1/ PTR FAMILY 6.1 [Jatropha curcas]
7 Hb_003777_090 0.0758989449 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
8 Hb_015044_010 0.0771865812 - - hypothetical protein JCGZ_25130 [Jatropha curcas]
9 Hb_000270_090 0.0772470319 - - nitrate transporter, putative [Ricinus communis]
10 Hb_001321_010 0.0805492977 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
11 Hb_000962_090 0.0817974641 - - omega-6 fatty acid desaturase [Hevea brasiliensis]
12 Hb_000359_050 0.0830564541 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
13 Hb_005211_080 0.0874074563 - - hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
14 Hb_011013_040 0.0910089885 transcription factor TF Family: C2C2-YABBY unknown [Populus trichocarpa]
15 Hb_000294_020 0.0918455381 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
16 Hb_007545_070 0.0936708631 transcription factor TF Family: MYB PREDICTED: myb-related protein 306 [Populus euphratica]
17 Hb_080922_010 0.098337218 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
18 Hb_001159_050 0.1002243776 - - PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
19 Hb_010584_020 0.1013393627 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
20 Hb_002007_220 0.1017813415 - - PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_003937_010 Hb_003937_010 Hb_006618_110 Hb_006618_110 Hb_003937_010--Hb_006618_110 Hb_004994_030 Hb_004994_030 Hb_003937_010--Hb_004994_030 Hb_063405_010 Hb_063405_010 Hb_003937_010--Hb_063405_010 Hb_000155_020 Hb_000155_020 Hb_003937_010--Hb_000155_020 Hb_001014_240 Hb_001014_240 Hb_003937_010--Hb_001014_240 Hb_003777_090 Hb_003777_090 Hb_003937_010--Hb_003777_090 Hb_007545_070 Hb_007545_070 Hb_006618_110--Hb_007545_070 Hb_005892_050 Hb_005892_050 Hb_006618_110--Hb_005892_050 Hb_000486_020 Hb_000486_020 Hb_006618_110--Hb_000486_020 Hb_011013_040 Hb_011013_040 Hb_006618_110--Hb_011013_040 Hb_010136_010 Hb_010136_010 Hb_006618_110--Hb_010136_010 Hb_000270_090 Hb_000270_090 Hb_004994_030--Hb_000270_090 Hb_001321_010 Hb_001321_010 Hb_004994_030--Hb_001321_010 Hb_011104_020 Hb_011104_020 Hb_004994_030--Hb_011104_020 Hb_012389_010 Hb_012389_010 Hb_004994_030--Hb_012389_010 Hb_002073_150 Hb_002073_150 Hb_004994_030--Hb_002073_150 Hb_063405_010--Hb_003777_090 Hb_000705_010 Hb_000705_010 Hb_063405_010--Hb_000705_010 Hb_063405_010--Hb_001321_010 Hb_063405_010--Hb_000270_090 Hb_000697_020 Hb_000697_020 Hb_063405_010--Hb_000697_020 Hb_000155_020--Hb_011013_040 Hb_001159_050 Hb_001159_050 Hb_000155_020--Hb_001159_050 Hb_012395_090 Hb_012395_090 Hb_000155_020--Hb_012395_090 Hb_002007_220 Hb_002007_220 Hb_000155_020--Hb_002007_220 Hb_000155_020--Hb_010136_010 Hb_004017_030 Hb_004017_030 Hb_000155_020--Hb_004017_030 Hb_015044_010 Hb_015044_010 Hb_001014_240--Hb_015044_010 Hb_000359_050 Hb_000359_050 Hb_001014_240--Hb_000359_050 Hb_000962_090 Hb_000962_090 Hb_001014_240--Hb_000962_090 Hb_000128_040 Hb_000128_040 Hb_001014_240--Hb_000128_040 Hb_101133_030 Hb_101133_030 Hb_001014_240--Hb_101133_030 Hb_000340_280 Hb_000340_280 Hb_001014_240--Hb_000340_280 Hb_000294_020 Hb_000294_020 Hb_003777_090--Hb_000294_020 Hb_000236_130 Hb_000236_130 Hb_003777_090--Hb_000236_130 Hb_000483_470 Hb_000483_470 Hb_003777_090--Hb_000483_470 Hb_022167_010 Hb_022167_010 Hb_003777_090--Hb_022167_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0721686 0.5127 0.165019 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0346686 0.480451

CAGE analysis