Hb_003967_010

Information

Type -
Description -
Location Contig3967: 8057-10393
Sequence    

Annotation

kegg
ID rcu:RCOM_0814150
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002518804.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q949P1
description Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1
trembl
ID B9RY37
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0814150 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39593: 8495-9120 , PASA_asmbl_39594: 9354-10142 , PASA_asmbl_39595: 9482-9994 , PASA_asmbl_39596: 10210-10374
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003967_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_028008_030 0.106528579 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
3 Hb_000230_160 0.1185978444 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
4 Hb_001006_030 0.1206846822 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003266_060 0.1284839477 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
6 Hb_001493_170 0.1288362424 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
7 Hb_005333_120 0.1288397661 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
8 Hb_003805_080 0.1315404694 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
9 Hb_029866_080 0.1363072538 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
10 Hb_039496_010 0.1369300012 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
11 Hb_001998_260 0.1375731311 - - cytochrome P450, putative [Ricinus communis]
12 Hb_006314_020 0.1392428273 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
13 Hb_000963_010 0.1420616007 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
14 Hb_003787_060 0.1454391499 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
15 Hb_001856_150 0.1459923683 - - -
16 Hb_001799_090 0.1466836424 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
17 Hb_001564_090 0.146704495 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000172_740 0.1469631905 - - HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
19 Hb_002289_110 0.1477619484 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
20 Hb_000286_030 0.1478361581 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]

Gene co-expression network

sample Hb_003967_010 Hb_003967_010 Hb_028008_030 Hb_028008_030 Hb_003967_010--Hb_028008_030 Hb_000230_160 Hb_000230_160 Hb_003967_010--Hb_000230_160 Hb_001006_030 Hb_001006_030 Hb_003967_010--Hb_001006_030 Hb_003266_060 Hb_003266_060 Hb_003967_010--Hb_003266_060 Hb_001493_170 Hb_001493_170 Hb_003967_010--Hb_001493_170 Hb_005333_120 Hb_005333_120 Hb_003967_010--Hb_005333_120 Hb_003805_080 Hb_003805_080 Hb_028008_030--Hb_003805_080 Hb_028008_030--Hb_000230_160 Hb_001799_090 Hb_001799_090 Hb_028008_030--Hb_001799_090 Hb_001998_260 Hb_001998_260 Hb_028008_030--Hb_001998_260 Hb_039496_010 Hb_039496_010 Hb_028008_030--Hb_039496_010 Hb_003058_180 Hb_003058_180 Hb_000230_160--Hb_003058_180 Hb_000081_030 Hb_000081_030 Hb_000230_160--Hb_000081_030 Hb_001856_150 Hb_001856_150 Hb_000230_160--Hb_001856_150 Hb_000286_030 Hb_000286_030 Hb_000230_160--Hb_000286_030 Hb_006314_020 Hb_006314_020 Hb_000230_160--Hb_006314_020 Hb_000069_520 Hb_000069_520 Hb_001006_030--Hb_000069_520 Hb_002374_060 Hb_002374_060 Hb_001006_030--Hb_002374_060 Hb_001006_030--Hb_003266_060 Hb_002289_110 Hb_002289_110 Hb_001006_030--Hb_002289_110 Hb_000676_170 Hb_000676_170 Hb_001006_030--Hb_000676_170 Hb_003266_060--Hb_001998_260 Hb_005144_100 Hb_005144_100 Hb_003266_060--Hb_005144_100 Hb_003266_060--Hb_000676_170 Hb_003266_060--Hb_000069_520 Hb_000417_350 Hb_000417_350 Hb_003266_060--Hb_000417_350 Hb_001493_170--Hb_028008_030 Hb_000761_030 Hb_000761_030 Hb_001493_170--Hb_000761_030 Hb_001493_170--Hb_000230_160 Hb_008001_020 Hb_008001_020 Hb_001493_170--Hb_008001_020 Hb_001493_170--Hb_000081_030 Hb_004462_040 Hb_004462_040 Hb_005333_120--Hb_004462_040 Hb_003435_070 Hb_003435_070 Hb_005333_120--Hb_003435_070 Hb_001053_110 Hb_001053_110 Hb_005333_120--Hb_001053_110 Hb_005333_120--Hb_000417_350 Hb_002333_010 Hb_002333_010 Hb_005333_120--Hb_002333_010 Hb_005333_120--Hb_001856_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0499318 1.04154 0.277771 2.43674 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0284156 0.0670689 0 2.8347 0.281546

CAGE analysis