Hb_003992_230

Information

Type -
Description -
Location Contig3992: 141101-142285
Sequence    

Annotation

kegg
ID rcu:RCOM_0899880
description hypothetical protein
nr
ID XP_012073181.1
description PREDICTED: uncharacterized protein LOC105634858 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLG4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06142 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003992_230 0.0 - - PREDICTED: uncharacterized protein LOC105634858 [Jatropha curcas]
2 Hb_000302_090 0.1921122238 - - PREDICTED: protein SGT1 homolog [Prunus mume]
3 Hb_002232_090 0.2441536349 - - STS14 protein precursor, putative [Ricinus communis]
4 Hb_011437_030 0.2508699033 - - PREDICTED: uncharacterized protein LOC105037131, partial [Elaeis guineensis]
5 Hb_046417_010 0.2656881716 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
6 Hb_012754_020 0.2840841859 - - PREDICTED: uncharacterized protein LOC104229837 [Nicotiana sylvestris]
7 Hb_003185_090 0.2871591618 - - Boron transporter, putative [Ricinus communis]
8 Hb_001691_030 0.3005911709 - - lipoxygenase, putative [Ricinus communis]
9 Hb_001623_090 0.3005913427 - - PREDICTED: probable serine incorporator [Jatropha curcas]
10 Hb_005539_250 0.3027942045 - - -
11 Hb_006472_070 0.3049789091 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
12 Hb_002498_040 0.3088190074 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
13 Hb_001016_140 0.3125109203 - - PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
14 Hb_002598_010 0.3138013081 - - sugar transporter, putative [Ricinus communis]
15 Hb_042083_060 0.316228934 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Jatropha curcas]
16 Hb_003050_050 0.3190269727 - - hypothetical protein JCGZ_04619 [Jatropha curcas]
17 Hb_008145_010 0.3201036832 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_004162_010 0.3225847592 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005062_080 0.3236252227 - - MLO-like protein 4 [Gossypium arboreum]
20 Hb_002027_310 0.3257208119 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003992_230 Hb_003992_230 Hb_000302_090 Hb_000302_090 Hb_003992_230--Hb_000302_090 Hb_002232_090 Hb_002232_090 Hb_003992_230--Hb_002232_090 Hb_011437_030 Hb_011437_030 Hb_003992_230--Hb_011437_030 Hb_046417_010 Hb_046417_010 Hb_003992_230--Hb_046417_010 Hb_012754_020 Hb_012754_020 Hb_003992_230--Hb_012754_020 Hb_003185_090 Hb_003185_090 Hb_003992_230--Hb_003185_090 Hb_002284_180 Hb_002284_180 Hb_000302_090--Hb_002284_180 Hb_000302_090--Hb_011437_030 Hb_001623_090 Hb_001623_090 Hb_000302_090--Hb_001623_090 Hb_000302_090--Hb_003185_090 Hb_000302_090--Hb_012754_020 Hb_002498_040 Hb_002498_040 Hb_002232_090--Hb_002498_040 Hb_001691_030 Hb_001691_030 Hb_002232_090--Hb_001691_030 Hb_135008_010 Hb_135008_010 Hb_002232_090--Hb_135008_010 Hb_005539_250 Hb_005539_250 Hb_002232_090--Hb_005539_250 Hb_000579_050 Hb_000579_050 Hb_002232_090--Hb_000579_050 Hb_015970_010 Hb_015970_010 Hb_011437_030--Hb_015970_010 Hb_003055_170 Hb_003055_170 Hb_011437_030--Hb_003055_170 Hb_005699_080 Hb_005699_080 Hb_011437_030--Hb_005699_080 Hb_000192_110 Hb_000192_110 Hb_011437_030--Hb_000192_110 Hb_002603_030 Hb_002603_030 Hb_046417_010--Hb_002603_030 Hb_002027_310 Hb_002027_310 Hb_046417_010--Hb_002027_310 Hb_042083_060 Hb_042083_060 Hb_046417_010--Hb_042083_060 Hb_010174_140 Hb_010174_140 Hb_046417_010--Hb_010174_140 Hb_111985_160 Hb_111985_160 Hb_046417_010--Hb_111985_160 Hb_111985_120 Hb_111985_120 Hb_046417_010--Hb_111985_120 Hb_000985_070 Hb_000985_070 Hb_012754_020--Hb_000985_070 Hb_012754_020--Hb_003185_090 Hb_000302_210 Hb_000302_210 Hb_012754_020--Hb_000302_210 Hb_001493_160 Hb_001493_160 Hb_012754_020--Hb_001493_160 Hb_164162_010 Hb_164162_010 Hb_012754_020--Hb_164162_010 Hb_000125_220 Hb_000125_220 Hb_012754_020--Hb_000125_220 Hb_003185_090--Hb_001623_090 Hb_000227_370 Hb_000227_370 Hb_003185_090--Hb_000227_370 Hb_001022_050 Hb_001022_050 Hb_003185_090--Hb_001022_050 Hb_000914_130 Hb_000914_130 Hb_003185_090--Hb_000914_130 Hb_004162_010 Hb_004162_010 Hb_003185_090--Hb_004162_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.222064 0.369041 0.418893 0.189781 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.298553 0.871748 0

CAGE analysis