Hb_003994_070

Information

Type -
Description -
Location Contig3994: 72170-74928
Sequence    

Annotation

kegg
ID rcu:RCOM_1004260
description Anthranilate N-benzoyltransferase protein, putative (EC:2.3.1.144)
nr
ID XP_002519354.1
description Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
swissprot
ID Q8GSM7
description Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1
trembl
ID B9S035
description Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis GN=RCOM_1004260 PE=4 SV=1
Gene Ontology
ID GO:0047672
description shikimate o-hydroxycinnamoyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39731: 73218-74900
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003994_070 0.0 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
2 Hb_009851_090 0.0835562832 - - Protein ABIL2, putative [Ricinus communis]
3 Hb_003311_020 0.0842866886 - - conserved hypothetical protein [Ricinus communis]
4 Hb_155423_010 0.0937702376 - - -
5 Hb_035651_010 0.127374525 - - receptor-kinase, putative [Ricinus communis]
6 Hb_005920_030 0.1279141438 - - putative polyprotein [Oryza sativa Japonica Group]
7 Hb_001250_030 0.1289961042 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008834_010 0.1314894875 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
9 Hb_000567_270 0.1336966222 - - hypothetical protein L484_017162 [Morus notabilis]
10 Hb_032016_010 0.1339960112 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like isoform X1 [Citrus sinensis]
11 Hb_002631_270 0.1355015224 transcription factor TF Family: MYB hypothetical protein POPTR_0005s09930g [Populus trichocarpa]
12 Hb_004312_020 0.136789457 - - conserved hypothetical protein [Ricinus communis]
13 Hb_019654_170 0.1433148449 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 9 [Jatropha curcas]
14 Hb_043792_030 0.1478171888 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
15 Hb_020831_070 0.1536808229 - - hypothetical protein VITISV_027174 [Vitis vinifera]
16 Hb_017225_030 0.1546311934 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
17 Hb_011649_030 0.1547446928 - - hypothetical protein [Vitis hybrid cultivar]
18 Hb_002447_100 0.1547542249 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
19 Hb_001542_010 0.1554995103 - - hypothetical protein, partial [Pseudomonas fluorescens]
20 Hb_012796_030 0.1586641016 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_003994_070 Hb_003994_070 Hb_009851_090 Hb_009851_090 Hb_003994_070--Hb_009851_090 Hb_003311_020 Hb_003311_020 Hb_003994_070--Hb_003311_020 Hb_155423_010 Hb_155423_010 Hb_003994_070--Hb_155423_010 Hb_035651_010 Hb_035651_010 Hb_003994_070--Hb_035651_010 Hb_005920_030 Hb_005920_030 Hb_003994_070--Hb_005920_030 Hb_001250_030 Hb_001250_030 Hb_003994_070--Hb_001250_030 Hb_032016_010 Hb_032016_010 Hb_009851_090--Hb_032016_010 Hb_009851_090--Hb_003311_020 Hb_009851_090--Hb_155423_010 Hb_002631_270 Hb_002631_270 Hb_009851_090--Hb_002631_270 Hb_000567_270 Hb_000567_270 Hb_009851_090--Hb_000567_270 Hb_003311_020--Hb_000567_270 Hb_003311_020--Hb_032016_010 Hb_007533_050 Hb_007533_050 Hb_003311_020--Hb_007533_050 Hb_000432_020 Hb_000432_020 Hb_003311_020--Hb_000432_020 Hb_155423_010--Hb_002631_270 Hb_002447_100 Hb_002447_100 Hb_155423_010--Hb_002447_100 Hb_151870_010 Hb_151870_010 Hb_155423_010--Hb_151870_010 Hb_155423_010--Hb_000567_270 Hb_004520_010 Hb_004520_010 Hb_035651_010--Hb_004520_010 Hb_004312_020 Hb_004312_020 Hb_035651_010--Hb_004312_020 Hb_020831_070 Hb_020831_070 Hb_035651_010--Hb_020831_070 Hb_035651_010--Hb_009851_090 Hb_035651_010--Hb_005920_030 Hb_008055_030 Hb_008055_030 Hb_005920_030--Hb_008055_030 Hb_001856_280 Hb_001856_280 Hb_005920_030--Hb_001856_280 Hb_043792_030 Hb_043792_030 Hb_005920_030--Hb_043792_030 Hb_005920_030--Hb_003311_020 Hb_019654_170 Hb_019654_170 Hb_005920_030--Hb_019654_170 Hb_005920_030--Hb_000567_270 Hb_093388_010 Hb_093388_010 Hb_001250_030--Hb_093388_010 Hb_029510_060 Hb_029510_060 Hb_001250_030--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_001250_030--Hb_023738_010 Hb_001250_030--Hb_003311_020 Hb_003414_040 Hb_003414_040 Hb_001250_030--Hb_003414_040 Hb_001250_030--Hb_000432_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.820921 0.20908 0.642343 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0303214 0 0 1.05657 5.24567

CAGE analysis