Hb_003994_150

Information

Type -
Description -
Location Contig3994: 169564-177019
Sequence    

Annotation

kegg
ID tcc:TCM_027736
description Inorganic H pyrophosphatase family protein isoform 1
nr
ID XP_012087303.1
description PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
swissprot
ID Q9FWR2
description Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=3 SV=1
trembl
ID A0A067JQC1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22573 PE=3 SV=1
Gene Ontology
ID GO:0016020
description pyrophosphate-energized membrane proton pump 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39744: 169576-176902
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003994_150 0.0 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
2 Hb_003747_020 0.0729827619 - - PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [Jatropha curcas]
3 Hb_002044_150 0.0787931191 - - PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Jatropha curcas]
4 Hb_000872_010 0.0796120688 - - PREDICTED: putative ubiquitin-conjugating enzyme E2 38 [Jatropha curcas]
5 Hb_000069_210 0.0854420046 - - PREDICTED: exportin-2 [Jatropha curcas]
6 Hb_001876_010 0.0863007794 - - PREDICTED: arginyl-tRNA--protein transferase 2-like isoform X1 [Jatropha curcas]
7 Hb_000072_320 0.0865566852 - - PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Jatropha curcas]
8 Hb_029879_070 0.0868855512 - - PREDICTED: phospholipase A I [Jatropha curcas]
9 Hb_000254_090 0.0871479396 - - PREDICTED: la protein 2 [Jatropha curcas]
10 Hb_002169_050 0.0879274787 - - PREDICTED: inositol 1,3,4-trisphosphate 5/6-kinase 4 [Jatropha curcas]
11 Hb_000207_050 0.0902073285 - - PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]
12 Hb_000095_080 0.0908919047 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Jatropha curcas]
13 Hb_001936_130 0.0925084647 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
14 Hb_002026_150 0.0929099636 transcription factor TF Family: SNF2 PREDICTED: DNA repair helicase XPB1 isoform X1 [Jatropha curcas]
15 Hb_000656_010 0.0933665729 - - PREDICTED: uncharacterized protein LOC105631354 isoform X1 [Jatropha curcas]
16 Hb_006275_070 0.0954554679 - - PREDICTED: general transcription factor IIF subunit 2 [Jatropha curcas]
17 Hb_000212_380 0.0975277104 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
18 Hb_000352_340 0.0981280187 - - PREDICTED: importin-13 [Jatropha curcas]
19 Hb_000189_550 0.0981586841 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
20 Hb_019616_020 0.0984991475 - - PREDICTED: alanine--tRNA ligase [Jatropha curcas]

Gene co-expression network

sample Hb_003994_150 Hb_003994_150 Hb_003747_020 Hb_003747_020 Hb_003994_150--Hb_003747_020 Hb_002044_150 Hb_002044_150 Hb_003994_150--Hb_002044_150 Hb_000872_010 Hb_000872_010 Hb_003994_150--Hb_000872_010 Hb_000069_210 Hb_000069_210 Hb_003994_150--Hb_000069_210 Hb_001876_010 Hb_001876_010 Hb_003994_150--Hb_001876_010 Hb_000072_320 Hb_000072_320 Hb_003994_150--Hb_000072_320 Hb_003747_020--Hb_000872_010 Hb_019053_030 Hb_019053_030 Hb_003747_020--Hb_019053_030 Hb_005147_030 Hb_005147_030 Hb_003747_020--Hb_005147_030 Hb_001105_020 Hb_001105_020 Hb_003747_020--Hb_001105_020 Hb_002968_080 Hb_002968_080 Hb_003747_020--Hb_002968_080 Hb_007479_040 Hb_007479_040 Hb_002044_150--Hb_007479_040 Hb_004254_090 Hb_004254_090 Hb_002044_150--Hb_004254_090 Hb_026198_070 Hb_026198_070 Hb_002044_150--Hb_026198_070 Hb_168978_030 Hb_168978_030 Hb_002044_150--Hb_168978_030 Hb_000207_050 Hb_000207_050 Hb_002044_150--Hb_000207_050 Hb_000138_100 Hb_000138_100 Hb_002044_150--Hb_000138_100 Hb_000110_190 Hb_000110_190 Hb_000872_010--Hb_000110_190 Hb_001440_030 Hb_001440_030 Hb_000872_010--Hb_001440_030 Hb_000592_030 Hb_000592_030 Hb_000872_010--Hb_000592_030 Hb_056691_060 Hb_056691_060 Hb_000872_010--Hb_056691_060 Hb_000053_040 Hb_000053_040 Hb_000872_010--Hb_000053_040 Hb_000872_010--Hb_001876_010 Hb_000069_210--Hb_001876_010 Hb_007416_090 Hb_007416_090 Hb_000069_210--Hb_007416_090 Hb_000095_080 Hb_000095_080 Hb_000069_210--Hb_000095_080 Hb_001789_150 Hb_001789_150 Hb_000069_210--Hb_001789_150 Hb_001936_130 Hb_001936_130 Hb_000069_210--Hb_001936_130 Hb_000094_210 Hb_000094_210 Hb_000069_210--Hb_000094_210 Hb_000011_060 Hb_000011_060 Hb_001876_010--Hb_000011_060 Hb_002908_050 Hb_002908_050 Hb_001876_010--Hb_002908_050 Hb_000189_550 Hb_000189_550 Hb_001876_010--Hb_000189_550 Hb_000028_390 Hb_000028_390 Hb_001876_010--Hb_000028_390 Hb_000984_170 Hb_000984_170 Hb_001876_010--Hb_000984_170 Hb_000072_320--Hb_000207_050 Hb_000072_320--Hb_000095_080 Hb_001016_120 Hb_001016_120 Hb_000072_320--Hb_001016_120 Hb_002169_040 Hb_002169_040 Hb_000072_320--Hb_002169_040 Hb_029510_050 Hb_029510_050 Hb_000072_320--Hb_029510_050 Hb_001314_050 Hb_001314_050 Hb_000072_320--Hb_001314_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.1692 6.50135 9.79902 18.4246 15.7975 17.3303
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.0562 10.9547 22.8429 25.4673 19.9438

CAGE analysis