Hb_003994_170

Information

Type -
Description -
Location Contig3994: 183430-185593
Sequence    

Annotation

kegg
ID rcu:RCOM_1573550
description Indole-3-acetic acid-induced protein ARG7, putative
nr
ID XP_002513310.1
description Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
swissprot
ID Q9SGU2
description Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1
trembl
ID B9RHU1
description Indole-3-acetic acid-induced protein ARG7, putative OS=Ricinus communis GN=RCOM_1573550 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003994_170 0.0 - - Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
2 Hb_026747_020 0.1550763049 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_009393_170 0.2428710306 - - PREDICTED: vestitone reductase-like [Jatropha curcas]
4 Hb_000454_060 0.2741474798 - - Uncharacterized protein TCM_006778 [Theobroma cacao]
5 Hb_001232_120 0.277527059 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
6 Hb_004116_130 0.2837630934 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
7 Hb_000317_400 0.291774748 transcription factor TF Family: zf-HD conserved hypothetical protein [Ricinus communis]
8 Hb_009780_080 0.291930548 - - PREDICTED: valine--tRNA ligase, mitochondrial isoform X2 [Jatropha curcas]
9 Hb_000275_130 0.2940379048 - - hypothetical protein CICLE_v10003066mg [Citrus clementina]
10 Hb_000693_020 0.2980405156 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
11 Hb_001865_080 0.2993497139 - - enoyl-CoA hydratase/isomerase family protein [Populus trichocarpa]
12 Hb_002234_190 0.3043150857 - - PREDICTED: putative non-specific lipid-transfer protein 14 [Jatropha curcas]
13 Hb_007333_010 0.3059421436 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_010288_040 0.3091362701 - - PREDICTED: transmembrane protein 205-like [Eucalyptus grandis]
15 Hb_000087_050 0.309458462 - - hypothetical protein JCGZ_16227 [Jatropha curcas]
16 Hb_004525_060 0.3120135197 - - -
17 Hb_002301_360 0.312027394 - - hypothetical protein CICLE_v10017252mg [Citrus clementina]
18 Hb_003918_020 0.3136329621 - - -
19 Hb_004732_010 0.3169626098 - - -
20 Hb_002828_040 0.3170699935 - - transmembrane protein, putative [Medicago truncatula]

Gene co-expression network

sample Hb_003994_170 Hb_003994_170 Hb_026747_020 Hb_026747_020 Hb_003994_170--Hb_026747_020 Hb_009393_170 Hb_009393_170 Hb_003994_170--Hb_009393_170 Hb_000454_060 Hb_000454_060 Hb_003994_170--Hb_000454_060 Hb_001232_120 Hb_001232_120 Hb_003994_170--Hb_001232_120 Hb_004116_130 Hb_004116_130 Hb_003994_170--Hb_004116_130 Hb_000317_400 Hb_000317_400 Hb_003994_170--Hb_000317_400 Hb_026747_020--Hb_001232_120 Hb_026747_020--Hb_009393_170 Hb_002043_110 Hb_002043_110 Hb_026747_020--Hb_002043_110 Hb_026747_020--Hb_000454_060 Hb_000048_020 Hb_000048_020 Hb_026747_020--Hb_000048_020 Hb_000087_050 Hb_000087_050 Hb_009393_170--Hb_000087_050 Hb_001183_010 Hb_001183_010 Hb_009393_170--Hb_001183_010 Hb_011861_120 Hb_011861_120 Hb_009393_170--Hb_011861_120 Hb_002234_190 Hb_002234_190 Hb_009393_170--Hb_002234_190 Hb_002876_290 Hb_002876_290 Hb_009393_170--Hb_002876_290 Hb_112023_010 Hb_112023_010 Hb_009393_170--Hb_112023_010 Hb_004525_060 Hb_004525_060 Hb_000454_060--Hb_004525_060 Hb_132998_020 Hb_132998_020 Hb_000454_060--Hb_132998_020 Hb_021888_050 Hb_021888_050 Hb_000454_060--Hb_021888_050 Hb_001504_120 Hb_001504_120 Hb_000454_060--Hb_001504_120 Hb_009780_080 Hb_009780_080 Hb_000454_060--Hb_009780_080 Hb_000454_060--Hb_000317_400 Hb_001232_120--Hb_000048_020 Hb_001232_120--Hb_004525_060 Hb_012807_010 Hb_012807_010 Hb_001232_120--Hb_012807_010 Hb_000107_640 Hb_000107_640 Hb_001232_120--Hb_000107_640 Hb_000693_020 Hb_000693_020 Hb_004116_130--Hb_000693_020 Hb_003687_030 Hb_003687_030 Hb_004116_130--Hb_003687_030 Hb_005000_250 Hb_005000_250 Hb_004116_130--Hb_005000_250 Hb_006816_400 Hb_006816_400 Hb_004116_130--Hb_006816_400 Hb_000504_110 Hb_000504_110 Hb_004116_130--Hb_000504_110 Hb_004102_030 Hb_004102_030 Hb_004116_130--Hb_004102_030 Hb_000329_250 Hb_000329_250 Hb_000317_400--Hb_000329_250 Hb_000923_050 Hb_000923_050 Hb_000317_400--Hb_000923_050 Hb_001136_010 Hb_001136_010 Hb_000317_400--Hb_001136_010 Hb_000742_110 Hb_000742_110 Hb_000317_400--Hb_000742_110 Hb_001824_010 Hb_001824_010 Hb_000317_400--Hb_001824_010 Hb_001277_320 Hb_001277_320 Hb_000317_400--Hb_001277_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0271227 0.132029 0.0203902 0.0693972 0 0.167689
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.37391 0.147014 0 0.197956 0

CAGE analysis