Hb_003994_180

Information

Type -
Description -
Location Contig3994: 189027-191962
Sequence    

Annotation

kegg
ID pop:POPTR_0008s00470g
description POPTRDRAFT_655635; hypothetical protein
nr
ID XP_012087310.1
description PREDICTED: probable mitochondrial adenine nucleotide transporter BTL1 [Jatropha curcas]
swissprot
ID Q9LJX5
description Probable mitochondrial adenine nucleotide transporter BTL1 OS=Arabidopsis thaliana GN=At3g20240 PE=2 SV=1
trembl
ID A0A067JZR8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22579 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable mitochondrial adenine nucleotide transporter btl1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39752: 189147-190200 , PASA_asmbl_39753: 190325-191830
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003994_180 0.0 - - PREDICTED: probable mitochondrial adenine nucleotide transporter BTL1 [Jatropha curcas]
2 Hb_023226_040 0.0745616715 - - PREDICTED: kxDL motif-containing protein 1 [Jatropha curcas]
3 Hb_000808_040 0.0764401948 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3 [Jatropha curcas]
4 Hb_001195_690 0.0767142958 - - PREDICTED: E3 ubiquitin-protein ligase RNF185 [Jatropha curcas]
5 Hb_004324_310 0.0801252936 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001138_050 0.0831769328 - - hypothetical protein JCGZ_15696 [Jatropha curcas]
7 Hb_159558_030 0.08325442 - - ubiquitin-conjugating enzyme E2 variant 1D [Jatropha curcas]
8 Hb_002105_090 0.0852620894 - - Rab4 [Hevea brasiliensis]
9 Hb_005000_210 0.0873922096 - - PREDICTED: translation machinery-associated protein 22 [Jatropha curcas]
10 Hb_000000_160 0.0876615286 - - PREDICTED: membrin-11 [Jatropha curcas]
11 Hb_021254_030 0.088756986 - - PREDICTED: mitochondrial substrate carrier family protein P [Jatropha curcas]
12 Hb_001221_410 0.0895422923 - - PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial [Jatropha curcas]
13 Hb_003392_040 0.0897504357 - - PREDICTED: D-aminoacyl-tRNA deacylase [Jatropha curcas]
14 Hb_026198_050 0.0898460411 - - PREDICTED: subtilisin-like protease SBT3.3 [Jatropha curcas]
15 Hb_009615_150 0.0907758358 - - PREDICTED: transcription elongation factor SPT4 homolog 2 [Jatropha curcas]
16 Hb_005928_110 0.0908403642 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
17 Hb_001259_090 0.0919897534 - - hypothetical protein B456_005G056700 [Gossypium raimondii]
18 Hb_000500_130 0.0919996231 - - small GTPase [Hevea brasiliensis]
19 Hb_007919_060 0.0921441351 - - PREDICTED: UPF0047 protein C4A8.02c [Jatropha curcas]
20 Hb_000661_250 0.0926206888 - - PREDICTED: RNA-binding protein 8A [Jatropha curcas]

Gene co-expression network

sample Hb_003994_180 Hb_003994_180 Hb_023226_040 Hb_023226_040 Hb_003994_180--Hb_023226_040 Hb_000808_040 Hb_000808_040 Hb_003994_180--Hb_000808_040 Hb_001195_690 Hb_001195_690 Hb_003994_180--Hb_001195_690 Hb_004324_310 Hb_004324_310 Hb_003994_180--Hb_004324_310 Hb_001138_050 Hb_001138_050 Hb_003994_180--Hb_001138_050 Hb_159558_030 Hb_159558_030 Hb_003994_180--Hb_159558_030 Hb_002007_060 Hb_002007_060 Hb_023226_040--Hb_002007_060 Hb_000866_270 Hb_000866_270 Hb_023226_040--Hb_000866_270 Hb_000023_230 Hb_000023_230 Hb_023226_040--Hb_000023_230 Hb_004657_050 Hb_004657_050 Hb_023226_040--Hb_004657_050 Hb_000000_160 Hb_000000_160 Hb_023226_040--Hb_000000_160 Hb_028995_040 Hb_028995_040 Hb_023226_040--Hb_028995_040 Hb_070739_010 Hb_070739_010 Hb_000808_040--Hb_070739_010 Hb_015941_030 Hb_015941_030 Hb_000808_040--Hb_015941_030 Hb_086639_070 Hb_086639_070 Hb_000808_040--Hb_086639_070 Hb_008406_160 Hb_008406_160 Hb_000808_040--Hb_008406_160 Hb_000465_430 Hb_000465_430 Hb_000808_040--Hb_000465_430 Hb_001195_690--Hb_004324_310 Hb_003052_100 Hb_003052_100 Hb_001195_690--Hb_003052_100 Hb_158092_070 Hb_158092_070 Hb_001195_690--Hb_158092_070 Hb_021254_030 Hb_021254_030 Hb_001195_690--Hb_021254_030 Hb_004657_020 Hb_004657_020 Hb_001195_690--Hb_004657_020 Hb_011689_080 Hb_011689_080 Hb_004324_310--Hb_011689_080 Hb_002078_150 Hb_002078_150 Hb_004324_310--Hb_002078_150 Hb_002774_060 Hb_002774_060 Hb_004324_310--Hb_002774_060 Hb_002105_090 Hb_002105_090 Hb_004324_310--Hb_002105_090 Hb_001377_290 Hb_001377_290 Hb_004324_310--Hb_001377_290 Hb_000398_180 Hb_000398_180 Hb_001138_050--Hb_000398_180 Hb_000720_120 Hb_000720_120 Hb_001138_050--Hb_000720_120 Hb_001138_050--Hb_001377_290 Hb_005357_030 Hb_005357_030 Hb_001138_050--Hb_005357_030 Hb_001259_090 Hb_001259_090 Hb_001138_050--Hb_001259_090 Hb_019253_020 Hb_019253_020 Hb_001138_050--Hb_019253_020 Hb_000500_130 Hb_000500_130 Hb_159558_030--Hb_000500_130 Hb_002400_220 Hb_002400_220 Hb_159558_030--Hb_002400_220 Hb_000272_100 Hb_000272_100 Hb_159558_030--Hb_000272_100 Hb_006569_020 Hb_006569_020 Hb_159558_030--Hb_006569_020 Hb_159558_030--Hb_158092_070 Hb_002553_020 Hb_002553_020 Hb_159558_030--Hb_002553_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.9038 12.1364 7.19541 12.1653 19.8104 19.8096
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.5343 22.9724 13.997 7.68156 3.44715

CAGE analysis