Hb_003995_010

Information

Type -
Description -
Location Contig3995: 8860-9766
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003995_010 0.0 - - -
2 Hb_173178_020 0.1052212823 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X1 [Jatropha curcas]
3 Hb_057490_010 0.1154547995 - - PREDICTED: mannose-1-phosphate guanyltransferase alpha [Jatropha curcas]
4 Hb_003716_020 0.1309132755 - - PREDICTED: putative vesicle-associated membrane protein 726 [Jatropha curcas]
5 Hb_004218_070 0.1343997224 - - annexin [Manihot esculenta]
6 Hb_175612_010 0.1376892901 transcription factor TF Family: MBF1 orf [Ricinus communis]
7 Hb_000213_070 0.1405530725 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
8 Hb_001616_090 0.1412426525 - - PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X2 [Jatropha curcas]
9 Hb_003477_010 0.1434197047 - - hypothetical protein JCGZ_21107 [Jatropha curcas]
10 Hb_000152_670 0.1443735662 - - hypothetical protein VITISV_037603 [Vitis vinifera]
11 Hb_023020_060 0.1460072498 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
12 Hb_003050_370 0.1465240055 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
13 Hb_007668_020 0.1482856555 - - PREDICTED: uncharacterized protein LOC105631102 [Jatropha curcas]
14 Hb_007380_110 0.149490109 - - hypothetical protein JCGZ_16415 [Jatropha curcas]
15 Hb_001894_030 0.1511581958 - - Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
16 Hb_007534_040 0.1523087378 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
17 Hb_003581_020 0.1524579946 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
18 Hb_009838_130 0.1528057058 - - hypothetical protein CISIN_1g010403mg [Citrus sinensis]
19 Hb_000814_090 0.1537681669 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001910_020 0.1538818831 - - PREDICTED: ubiquitin-associated domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_003995_010 Hb_003995_010 Hb_173178_020 Hb_173178_020 Hb_003995_010--Hb_173178_020 Hb_057490_010 Hb_057490_010 Hb_003995_010--Hb_057490_010 Hb_003716_020 Hb_003716_020 Hb_003995_010--Hb_003716_020 Hb_004218_070 Hb_004218_070 Hb_003995_010--Hb_004218_070 Hb_175612_010 Hb_175612_010 Hb_003995_010--Hb_175612_010 Hb_000213_070 Hb_000213_070 Hb_003995_010--Hb_000213_070 Hb_001616_090 Hb_001616_090 Hb_173178_020--Hb_001616_090 Hb_031091_010 Hb_031091_010 Hb_173178_020--Hb_031091_010 Hb_173178_020--Hb_003716_020 Hb_000352_090 Hb_000352_090 Hb_173178_020--Hb_000352_090 Hb_009411_020 Hb_009411_020 Hb_173178_020--Hb_009411_020 Hb_008714_020 Hb_008714_020 Hb_173178_020--Hb_008714_020 Hb_025048_040 Hb_025048_040 Hb_057490_010--Hb_025048_040 Hb_000814_090 Hb_000814_090 Hb_057490_010--Hb_000814_090 Hb_001278_060 Hb_001278_060 Hb_057490_010--Hb_001278_060 Hb_057490_010--Hb_003716_020 Hb_057490_010--Hb_000213_070 Hb_011497_010 Hb_011497_010 Hb_003716_020--Hb_011497_010 Hb_007668_020 Hb_007668_020 Hb_003716_020--Hb_007668_020 Hb_003581_020 Hb_003581_020 Hb_003716_020--Hb_003581_020 Hb_005000_270 Hb_005000_270 Hb_003716_020--Hb_005000_270 Hb_000849_100 Hb_000849_100 Hb_003716_020--Hb_000849_100 Hb_006002_030 Hb_006002_030 Hb_003716_020--Hb_006002_030 Hb_001279_330 Hb_001279_330 Hb_004218_070--Hb_001279_330 Hb_004218_070--Hb_007668_020 Hb_004218_070--Hb_000213_070 Hb_009913_050 Hb_009913_050 Hb_004218_070--Hb_009913_050 Hb_007757_100 Hb_007757_100 Hb_004218_070--Hb_007757_100 Hb_000199_080 Hb_000199_080 Hb_004218_070--Hb_000199_080 Hb_007534_040 Hb_007534_040 Hb_175612_010--Hb_007534_040 Hb_000617_220 Hb_000617_220 Hb_175612_010--Hb_000617_220 Hb_000175_390 Hb_000175_390 Hb_175612_010--Hb_000175_390 Hb_000236_300 Hb_000236_300 Hb_175612_010--Hb_000236_300 Hb_004447_030 Hb_004447_030 Hb_175612_010--Hb_004447_030 Hb_000156_140 Hb_000156_140 Hb_175612_010--Hb_000156_140 Hb_000213_070--Hb_001278_060 Hb_000213_070--Hb_006002_030 Hb_000331_190 Hb_000331_190 Hb_000213_070--Hb_000331_190 Hb_002675_060 Hb_002675_060 Hb_000213_070--Hb_002675_060 Hb_000213_070--Hb_007668_020 Hb_078477_040 Hb_078477_040 Hb_000213_070--Hb_078477_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.22658 1.73065 1.27989 1.62407 3.78573 5.48336
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.52646 1.37041 0.540168 1.40832 0

CAGE analysis