Hb_004007_070

Information

Type -
Description -
Location Contig4007: 61919-66720
Sequence    

Annotation

kegg
ID rcu:RCOM_0580310
description adenylsulfate kinase, putative (EC:1.3.1.74)
nr
ID XP_002525273.1
description adenylsulfate kinase, putative [Ricinus communis]
swissprot
ID O49204
description Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus GN=AKN PE=2 SV=1
trembl
ID B9SH04
description Adenylyl-sulfate kinase OS=Ricinus communis GN=RCOM_0580310 PE=3 SV=1
Gene Ontology
ID GO:0004020
description adenylyl-sulfate kinase chloroplastic isoform x5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39838: 62038-66680 , PASA_asmbl_39839: 62558-62718
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004007_070 0.0 - - adenylsulfate kinase, putative [Ricinus communis]
2 Hb_012395_110 0.0803510608 - - PREDICTED: peroxygenase [Jatropha curcas]
3 Hb_000098_170 0.0894720284 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
4 Hb_000086_090 0.096886341 - - PREDICTED: U-box domain-containing protein 3 [Jatropha curcas]
5 Hb_000049_270 0.1006223474 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
6 Hb_000365_280 0.1040006619 - - calcium binding protein/cast, putative [Ricinus communis]
7 Hb_002893_030 0.1056536814 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
8 Hb_001102_160 0.1210789987 - - PREDICTED: galacturonokinase [Jatropha curcas]
9 Hb_006570_090 0.1212774721 - - tubulin beta chain, putative [Ricinus communis]
10 Hb_084147_010 0.1291559046 - - amino acid transporter, putative [Ricinus communis]
11 Hb_004241_110 0.1311623838 - - Minor allergen Alt a, putative [Ricinus communis]
12 Hb_003001_130 0.1334093576 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000349_200 0.1342166296 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
14 Hb_010883_180 0.1381670202 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
15 Hb_000603_020 0.1382900379 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
16 Hb_000479_060 0.1391497324 - - PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]
17 Hb_000260_110 0.1395239569 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
18 Hb_019516_060 0.1416979002 - - PREDICTED: uncharacterized protein LOC105634259 [Jatropha curcas]
19 Hb_000023_110 0.1417800535 - - PREDICTED: probable methyltransferase PMT21 [Jatropha curcas]
20 Hb_000424_030 0.1442968868 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004007_070 Hb_004007_070 Hb_012395_110 Hb_012395_110 Hb_004007_070--Hb_012395_110 Hb_000098_170 Hb_000098_170 Hb_004007_070--Hb_000098_170 Hb_000086_090 Hb_000086_090 Hb_004007_070--Hb_000086_090 Hb_000049_270 Hb_000049_270 Hb_004007_070--Hb_000049_270 Hb_000365_280 Hb_000365_280 Hb_004007_070--Hb_000365_280 Hb_002893_030 Hb_002893_030 Hb_004007_070--Hb_002893_030 Hb_012395_110--Hb_000086_090 Hb_004241_110 Hb_004241_110 Hb_012395_110--Hb_004241_110 Hb_001102_160 Hb_001102_160 Hb_012395_110--Hb_001102_160 Hb_084147_010 Hb_084147_010 Hb_012395_110--Hb_084147_010 Hb_019516_060 Hb_019516_060 Hb_012395_110--Hb_019516_060 Hb_000098_170--Hb_000086_090 Hb_000098_170--Hb_000049_270 Hb_006570_090 Hb_006570_090 Hb_000098_170--Hb_006570_090 Hb_006889_030 Hb_006889_030 Hb_000098_170--Hb_006889_030 Hb_000098_170--Hb_012395_110 Hb_000086_090--Hb_001102_160 Hb_010883_180 Hb_010883_180 Hb_000086_090--Hb_010883_180 Hb_000349_200 Hb_000349_200 Hb_000086_090--Hb_000349_200 Hb_000049_270--Hb_006570_090 Hb_000023_110 Hb_000023_110 Hb_000049_270--Hb_000023_110 Hb_012807_150 Hb_012807_150 Hb_000049_270--Hb_012807_150 Hb_000049_270--Hb_006889_030 Hb_000479_060 Hb_000479_060 Hb_000365_280--Hb_000479_060 Hb_000365_280--Hb_002893_030 Hb_005054_020 Hb_005054_020 Hb_000365_280--Hb_005054_020 Hb_000109_190 Hb_000109_190 Hb_000365_280--Hb_000109_190 Hb_002026_050 Hb_002026_050 Hb_000365_280--Hb_002026_050 Hb_188281_010 Hb_188281_010 Hb_002893_030--Hb_188281_010 Hb_103942_030 Hb_103942_030 Hb_002893_030--Hb_103942_030 Hb_002893_030--Hb_012395_110 Hb_002893_030--Hb_002026_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.913345 6.05787 8.81919 24.0163 0.665723 0.430376
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.972143 1.1145 2.18407 1.88164 8.07874

CAGE analysis