Hb_004017_030

Information

Type -
Description -
Location Contig4017: 64557-65468
Sequence    

Annotation

kegg
ID rcu:RCOM_0814040
description Arylacetamide deacetylase, putative
nr
ID XP_012086298.1
description PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
swissprot
ID Q5NUF4
description 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata GN=HIDM PE=1 SV=1
trembl
ID A0A067K295
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22839 PE=4 SV=1
Gene Ontology
ID GO:0016787
description a g-specific adenine glycosylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004017_030 0.0 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
2 Hb_007462_020 0.0625619549 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
3 Hb_000155_020 0.063451278 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_001369_340 0.065795358 - - Peroxisomal membrane protein 11B [Theobroma cacao]
5 Hb_003767_060 0.0665174183 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
6 Hb_010136_010 0.0769858386 - - Putative receptor-like protein kinase [Glycine soja]
7 Hb_002284_160 0.0786181166 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
8 Hb_002010_030 0.0793300049 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
9 Hb_004117_380 0.0817430604 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]
10 Hb_000270_090 0.0820517873 - - nitrate transporter, putative [Ricinus communis]
11 Hb_002007_220 0.0851014114 - - PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Jatropha curcas]
12 Hb_001321_010 0.0851145309 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
13 Hb_001115_070 0.0852603109 - - RecName: Full=CASP-like protein 2C1; Short=PtCASPL2C1 [Populus trichocarpa]
14 Hb_000025_700 0.0862288952 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
15 Hb_003209_150 0.089691079 - - CLE9, putative [Ricinus communis]
16 Hb_001159_050 0.0925946658 - - PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
17 Hb_000460_040 0.0932975119 - - PREDICTED: protein phosphatase 2C 57 [Jatropha curcas]
18 Hb_000031_320 0.0965656703 - - unnamed protein product [Vitis vinifera]
19 Hb_002407_090 0.097907843 - - hypothetical protein JCGZ_00747 [Jatropha curcas]
20 Hb_063405_010 0.0991416114 - - PREDICTED: probable terpene synthase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_004017_030 Hb_004017_030 Hb_007462_020 Hb_007462_020 Hb_004017_030--Hb_007462_020 Hb_000155_020 Hb_000155_020 Hb_004017_030--Hb_000155_020 Hb_001369_340 Hb_001369_340 Hb_004017_030--Hb_001369_340 Hb_003767_060 Hb_003767_060 Hb_004017_030--Hb_003767_060 Hb_010136_010 Hb_010136_010 Hb_004017_030--Hb_010136_010 Hb_002284_160 Hb_002284_160 Hb_004017_030--Hb_002284_160 Hb_007462_020--Hb_003767_060 Hb_007462_020--Hb_001369_340 Hb_000460_040 Hb_000460_040 Hb_007462_020--Hb_000460_040 Hb_007462_020--Hb_000155_020 Hb_000025_700 Hb_000025_700 Hb_007462_020--Hb_000025_700 Hb_011013_040 Hb_011013_040 Hb_000155_020--Hb_011013_040 Hb_001159_050 Hb_001159_050 Hb_000155_020--Hb_001159_050 Hb_012395_090 Hb_012395_090 Hb_000155_020--Hb_012395_090 Hb_002007_220 Hb_002007_220 Hb_000155_020--Hb_002007_220 Hb_000155_020--Hb_010136_010 Hb_001369_340--Hb_003767_060 Hb_001369_340--Hb_000025_700 Hb_004117_380 Hb_004117_380 Hb_001369_340--Hb_004117_380 Hb_003209_150 Hb_003209_150 Hb_001369_340--Hb_003209_150 Hb_002010_030 Hb_002010_030 Hb_003767_060--Hb_002010_030 Hb_003767_060--Hb_003209_150 Hb_002818_160 Hb_002818_160 Hb_003767_060--Hb_002818_160 Hb_003435_030 Hb_003435_030 Hb_010136_010--Hb_003435_030 Hb_010136_010--Hb_011013_040 Hb_001115_070 Hb_001115_070 Hb_010136_010--Hb_001115_070 Hb_010136_010--Hb_012395_090 Hb_002284_160--Hb_001115_070 Hb_000002_500 Hb_000002_500 Hb_002284_160--Hb_000002_500 Hb_002284_160--Hb_010136_010 Hb_127629_010 Hb_127629_010 Hb_002284_160--Hb_127629_010 Hb_000815_090 Hb_000815_090 Hb_002284_160--Hb_000815_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0496144 47.019 160.713 63.178 0.0248964 0.0850019
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.739881 0.0895168 0 3.87917 175.111

CAGE analysis