Hb_004032_110

Information

Type -
Description -
Location Contig4032: 135281-139430
Sequence    

Annotation

kegg
ID rcu:RCOM_1602670
description Polyneuridine-aldehyde esterase precursor, putative (EC:3.1.1.78)
nr
ID XP_012073514.1
description PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
swissprot
ID Q940H7
description Putative methylesterase 12, chloroplastic OS=Arabidopsis thaliana GN=MES12 PE=2 SV=1
trembl
ID A0A067KP22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07994 PE=4 SV=1
Gene Ontology
ID GO:0050529
description methylesterase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39993: 135311-139086
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004032_110 0.0 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
2 Hb_002949_020 0.1029837739 transcription factor TF Family: bHLH hypothetical protein POPTR_0002s23650g [Populus trichocarpa]
3 Hb_001439_010 0.1127285739 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
4 Hb_036388_010 0.1199109459 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
5 Hb_007590_100 0.1274036085 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
6 Hb_002397_050 0.1285152976 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
7 Hb_007134_030 0.1304198741 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
8 Hb_187959_010 0.1309848806 - - hypothetical protein JCGZ_12266 [Jatropha curcas]
9 Hb_006736_050 0.1313020676 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
10 Hb_001278_090 0.1349940306 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
11 Hb_003607_140 0.1381608488 - - 3-ketoacyl-CoA thiolase B, putative [Ricinus communis]
12 Hb_003052_080 0.1388440159 desease resistance Gene Name: PRK PREDICTED: uridine-cytidine kinase C [Jatropha curcas]
13 Hb_000768_150 0.1389206396 - - PREDICTED: glycine-rich protein A3-like [Fragaria vesca subsp. vesca]
14 Hb_161396_010 0.1393514791 - - hypothetical protein F383_26394 [Gossypium arboreum]
15 Hb_012053_020 0.1393682151 - - PREDICTED: magnesium transporter MRS2-11, chloroplastic [Jatropha curcas]
16 Hb_000140_500 0.1393787488 - - ABC transporter family protein [Hevea brasiliensis]
17 Hb_000680_070 0.1400404236 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
18 Hb_000054_030 0.1401299901 - - hypothetical protein POPTR_0010s17680g [Populus trichocarpa]
19 Hb_189003_070 0.140444933 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
20 Hb_000181_220 0.1439683378 - - PREDICTED: MATE efflux family protein LAL5-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_004032_110 Hb_004032_110 Hb_002949_020 Hb_002949_020 Hb_004032_110--Hb_002949_020 Hb_001439_010 Hb_001439_010 Hb_004032_110--Hb_001439_010 Hb_036388_010 Hb_036388_010 Hb_004032_110--Hb_036388_010 Hb_007590_100 Hb_007590_100 Hb_004032_110--Hb_007590_100 Hb_002397_050 Hb_002397_050 Hb_004032_110--Hb_002397_050 Hb_007134_030 Hb_007134_030 Hb_004032_110--Hb_007134_030 Hb_002235_110 Hb_002235_110 Hb_002949_020--Hb_002235_110 Hb_001278_090 Hb_001278_090 Hb_002949_020--Hb_001278_090 Hb_000054_030 Hb_000054_030 Hb_002949_020--Hb_000054_030 Hb_006370_050 Hb_006370_050 Hb_002949_020--Hb_006370_050 Hb_074197_030 Hb_074197_030 Hb_002949_020--Hb_074197_030 Hb_006469_090 Hb_006469_090 Hb_001439_010--Hb_006469_090 Hb_000680_070 Hb_000680_070 Hb_001439_010--Hb_000680_070 Hb_005663_090 Hb_005663_090 Hb_001439_010--Hb_005663_090 Hb_003607_140 Hb_003607_140 Hb_001439_010--Hb_003607_140 Hb_003879_020 Hb_003879_020 Hb_001439_010--Hb_003879_020 Hb_000768_150 Hb_000768_150 Hb_036388_010--Hb_000768_150 Hb_035834_010 Hb_035834_010 Hb_036388_010--Hb_035834_010 Hb_003783_050 Hb_003783_050 Hb_036388_010--Hb_003783_050 Hb_000997_320 Hb_000997_320 Hb_036388_010--Hb_000997_320 Hb_006736_050 Hb_006736_050 Hb_036388_010--Hb_006736_050 Hb_000417_380 Hb_000417_380 Hb_036388_010--Hb_000417_380 Hb_006615_230 Hb_006615_230 Hb_007590_100--Hb_006615_230 Hb_187959_010 Hb_187959_010 Hb_007590_100--Hb_187959_010 Hb_002495_030 Hb_002495_030 Hb_007590_100--Hb_002495_030 Hb_003052_080 Hb_003052_080 Hb_007590_100--Hb_003052_080 Hb_098795_030 Hb_098795_030 Hb_007590_100--Hb_098795_030 Hb_002397_050--Hb_000054_030 Hb_000457_250 Hb_000457_250 Hb_002397_050--Hb_000457_250 Hb_000115_360 Hb_000115_360 Hb_002397_050--Hb_000115_360 Hb_002716_110 Hb_002716_110 Hb_002397_050--Hb_002716_110 Hb_002397_050--Hb_006736_050 Hb_007416_290 Hb_007416_290 Hb_007134_030--Hb_007416_290 Hb_008143_040 Hb_008143_040 Hb_007134_030--Hb_008143_040 Hb_007134_030--Hb_187959_010 Hb_009545_030 Hb_009545_030 Hb_007134_030--Hb_009545_030 Hb_007134_030--Hb_001439_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.12809 2.45418 7.98057 13.5091 0.262065 0.154069
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.936023 0.961479 0.695702 7.70928 12.7455

CAGE analysis