Hb_004032_370

Information

Type -
Description -
Location Contig4032: 347433-354894
Sequence    

Annotation

kegg
ID rcu:RCOM_1602260
description phosphofructokinase, putative (EC:2.7.1.90)
nr
ID AIE47261.1
description pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
swissprot
ID Q41140
description Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1
trembl
ID A0A068LLM9
description Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Hevea brasiliensis GN=PFP2 PE=2 SV=1
Gene Ontology
ID GO:0003872
description pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40053: 347536-354982
cDNA
(Sanger)
(ID:Location)		 040_I05.ab1: 347536-350409

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004032_370 0.0 - - pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
2 Hb_004096_060 0.0603886472 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
3 Hb_000724_020 0.0624280947 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
4 Hb_002870_020 0.0764729995 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X1 [Jatropha curcas]
5 Hb_003228_100 0.0779828926 - - PREDICTED: kinesin-related protein 4 [Jatropha curcas]
6 Hb_002326_110 0.0903818955 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
7 Hb_077026_010 0.0904037646 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
8 Hb_000098_240 0.0929822445 - - PREDICTED: UDP-glucose:glycoprotein glucosyltransferase [Jatropha curcas]
9 Hb_004013_030 0.0941785378 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
10 Hb_033642_040 0.0950495777 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
11 Hb_001450_020 0.095170114 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
12 Hb_004109_120 0.0981362742 - - PREDICTED: kinesin-related protein 6 isoform X1 [Jatropha curcas]
13 Hb_005649_100 0.0987125357 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
14 Hb_000847_080 0.0994448748 - - PREDICTED: HAUS augmin-like complex subunit 3 [Jatropha curcas]
15 Hb_000154_050 0.0995361604 - - CMP-sialic acid transporter, putative [Ricinus communis]
16 Hb_025668_010 0.1000630424 - - unnamed protein product [Coffea canephora]
17 Hb_016448_010 0.1008282484 - - Protein MYG1, putative [Ricinus communis]
18 Hb_006588_160 0.1063761513 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
19 Hb_000012_270 0.1080053837 - - NADH-plastoquinone oxidoreductase, putative [Ricinus communis]
20 Hb_005895_010 0.1091336177 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004032_370 Hb_004032_370 Hb_004096_060 Hb_004096_060 Hb_004032_370--Hb_004096_060 Hb_000724_020 Hb_000724_020 Hb_004032_370--Hb_000724_020 Hb_002870_020 Hb_002870_020 Hb_004032_370--Hb_002870_020 Hb_003228_100 Hb_003228_100 Hb_004032_370--Hb_003228_100 Hb_002326_110 Hb_002326_110 Hb_004032_370--Hb_002326_110 Hb_077026_010 Hb_077026_010 Hb_004032_370--Hb_077026_010 Hb_033642_040 Hb_033642_040 Hb_004096_060--Hb_033642_040 Hb_025668_010 Hb_025668_010 Hb_004096_060--Hb_025668_010 Hb_004096_060--Hb_000724_020 Hb_001002_060 Hb_001002_060 Hb_004096_060--Hb_001002_060 Hb_004096_060--Hb_002326_110 Hb_004109_120 Hb_004109_120 Hb_000724_020--Hb_004109_120 Hb_001053_190 Hb_001053_190 Hb_000724_020--Hb_001053_190 Hb_000724_020--Hb_003228_100 Hb_000579_080 Hb_000579_080 Hb_000724_020--Hb_000579_080 Hb_002870_020--Hb_003228_100 Hb_001619_050 Hb_001619_050 Hb_002870_020--Hb_001619_050 Hb_000663_020 Hb_000663_020 Hb_002870_020--Hb_000663_020 Hb_002870_020--Hb_077026_010 Hb_000445_140 Hb_000445_140 Hb_002870_020--Hb_000445_140 Hb_000012_270 Hb_000012_270 Hb_003228_100--Hb_000012_270 Hb_006846_170 Hb_006846_170 Hb_003228_100--Hb_006846_170 Hb_003228_100--Hb_002326_110 Hb_002249_020 Hb_002249_020 Hb_003228_100--Hb_002249_020 Hb_005649_100 Hb_005649_100 Hb_002326_110--Hb_005649_100 Hb_000085_170 Hb_000085_170 Hb_002326_110--Hb_000085_170 Hb_000317_510 Hb_000317_510 Hb_002326_110--Hb_000317_510 Hb_000847_080 Hb_000847_080 Hb_002326_110--Hb_000847_080 Hb_000373_080 Hb_000373_080 Hb_002326_110--Hb_000373_080 Hb_002909_040 Hb_002909_040 Hb_002326_110--Hb_002909_040 Hb_077026_010--Hb_000847_080 Hb_002874_180 Hb_002874_180 Hb_077026_010--Hb_002874_180 Hb_021943_080 Hb_021943_080 Hb_077026_010--Hb_021943_080 Hb_000120_210 Hb_000120_210 Hb_077026_010--Hb_000120_210 Hb_004096_240 Hb_004096_240 Hb_077026_010--Hb_004096_240 Hb_077026_010--Hb_000663_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.8402 21.2662 78.3885 41.2924 35.7116 25.8441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.4536 9.54617 17.3867 26.8728 40.1181

CAGE analysis