Hb_004037_040

Information

Type -
Description -
Location Contig4037: 34679-39793
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa008778mg
description hypothetical protein
nr
ID XP_012070144.1
description PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
swissprot
ID Q40784
description Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
trembl
ID M5WSU7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008778mg PE=4 SV=1
Gene Ontology
ID GO:0016853
description glucose-6-phosphate 1-epimerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004037_040 0.0 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
2 Hb_001514_030 0.0713377366 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
3 Hb_001079_060 0.0854558552 - - PREDICTED: probable vacuolar amino acid transporter YPQ1 isoform X1 [Jatropha curcas]
4 Hb_000189_180 0.0864775479 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
5 Hb_001958_010 0.0866799643 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
6 Hb_016333_010 0.0968873713 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
7 Hb_168918_010 0.0972179411 - - pectin acetylesterase, putative [Ricinus communis]
8 Hb_004076_060 0.1002466072 - - PREDICTED: UDP-glycosyltransferase 82A1 [Jatropha curcas]
9 Hb_007218_040 0.1014536296 - - Leucine-rich repeat transmembrane protein kinase protein, putative [Theobroma cacao]
10 Hb_111985_100 0.1021279079 - - beta-galactosidase, putative [Ricinus communis]
11 Hb_001516_010 0.1026440617 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
12 Hb_005181_170 0.103319968 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
13 Hb_004122_010 0.1040990522 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
14 Hb_032572_010 0.1082405437 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
15 Hb_127839_010 0.1123595727 - - hypothetical protein PRUPE_ppa000956mg [Prunus persica]
16 Hb_007632_070 0.1125588136 - - kinase, putative [Ricinus communis]
17 Hb_000005_240 0.1130154998 - - Shugoshin-1, putative [Ricinus communis]
18 Hb_003894_170 0.1130242115 transcription factor TF Family: LOB hypothetical protein CICLE_v10021992mg [Citrus clementina]
19 Hb_039222_010 0.1136068419 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Jatropha curcas]
20 Hb_001287_090 0.1149619294 - - Endoglucanase 4 [Aegilops tauschii]

Gene co-expression network

sample Hb_004037_040 Hb_004037_040 Hb_001514_030 Hb_001514_030 Hb_004037_040--Hb_001514_030 Hb_001079_060 Hb_001079_060 Hb_004037_040--Hb_001079_060 Hb_000189_180 Hb_000189_180 Hb_004037_040--Hb_000189_180 Hb_001958_010 Hb_001958_010 Hb_004037_040--Hb_001958_010 Hb_016333_010 Hb_016333_010 Hb_004037_040--Hb_016333_010 Hb_168918_010 Hb_168918_010 Hb_004037_040--Hb_168918_010 Hb_001514_030--Hb_168918_010 Hb_001514_030--Hb_001079_060 Hb_001516_010 Hb_001516_010 Hb_001514_030--Hb_001516_010 Hb_004122_010 Hb_004122_010 Hb_001514_030--Hb_004122_010 Hb_007218_040 Hb_007218_040 Hb_001514_030--Hb_007218_040 Hb_001079_060--Hb_001516_010 Hb_002609_120 Hb_002609_120 Hb_001079_060--Hb_002609_120 Hb_009486_050 Hb_009486_050 Hb_001079_060--Hb_009486_050 Hb_002835_310 Hb_002835_310 Hb_001079_060--Hb_002835_310 Hb_000189_180--Hb_001958_010 Hb_004076_060 Hb_004076_060 Hb_000189_180--Hb_004076_060 Hb_000109_140 Hb_000109_140 Hb_000189_180--Hb_000109_140 Hb_005731_010 Hb_005731_010 Hb_000189_180--Hb_005731_010 Hb_032572_010 Hb_032572_010 Hb_000189_180--Hb_032572_010 Hb_001958_010--Hb_004076_060 Hb_001958_010--Hb_032572_010 Hb_001958_010--Hb_005731_010 Hb_001958_010--Hb_000109_140 Hb_000941_110 Hb_000941_110 Hb_001958_010--Hb_000941_110 Hb_001863_330 Hb_001863_330 Hb_016333_010--Hb_001863_330 Hb_127839_010 Hb_127839_010 Hb_016333_010--Hb_127839_010 Hb_007632_070 Hb_007632_070 Hb_016333_010--Hb_007632_070 Hb_087992_010 Hb_087992_010 Hb_016333_010--Hb_087992_010 Hb_016333_010--Hb_001958_010 Hb_168918_010--Hb_007218_040 Hb_003666_070 Hb_003666_070 Hb_168918_010--Hb_003666_070 Hb_168918_010--Hb_004122_010 Hb_005976_110 Hb_005976_110 Hb_168918_010--Hb_005976_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0203778 1.59344 1.61815 0.0228794 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.212864 0.895149

CAGE analysis