Hb_004044_040

Information

Type -
Description -
Location Contig4044: 41219-47573
Sequence    

Annotation

kegg
ID rcu:RCOM_0221090
description NADH-cytochrome B5 reductase, putative (EC:1.6.2.2)
nr
ID XP_012078748.1
description PREDICTED: NADH-cytochrome b5 reductase-like protein [Jatropha curcas]
swissprot
ID P83291
description NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=CBR2 PE=1 SV=2
trembl
ID A0A067K810
description NADH-cytochrome b5 reductase OS=Jatropha curcas GN=JCGZ_13301 PE=3 SV=1
Gene Ontology
ID GO:0005758
description nadh-cytochrome b5 reductase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40118: 41219-47575 , PASA_asmbl_40119: 41297-47577
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004044_040 0.0 - - PREDICTED: NADH-cytochrome b5 reductase-like protein [Jatropha curcas]
2 Hb_008103_050 0.0922703589 - - hypothetical protein JCGZ_07422 [Jatropha curcas]
3 Hb_007894_170 0.0997396444 - - PREDICTED: UPF0136 membrane protein At2g26240-like [Jatropha curcas]
4 Hb_000174_210 0.1031819277 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
5 Hb_076233_040 0.1031897067 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
6 Hb_000331_180 0.1048355469 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105640220 [Jatropha curcas]
7 Hb_006816_260 0.1064142203 - - hypothetical protein JCGZ_23244 [Jatropha curcas]
8 Hb_002681_200 0.1117497018 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Jatropha curcas]
9 Hb_005391_040 0.1127721415 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]
10 Hb_000994_120 0.1135174486 - - unknown [Populus trichocarpa]
11 Hb_003994_290 0.1145802007 - - PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Jatropha curcas]
12 Hb_000034_070 0.1150439165 - - PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Jatropha curcas]
13 Hb_000392_340 0.1157087692 - - PREDICTED: vacuolar protein sorting-associated protein 29 [Jatropha curcas]
14 Hb_001124_090 0.1160230003 - - acyl carrier protein, putative [Ricinus communis]
15 Hb_001366_370 0.1174995621 - - PREDICTED: aarF domain-containing protein kinase 4 isoform X1 [Jatropha curcas]
16 Hb_000665_050 0.117713454 - - PREDICTED: aberrant root formation protein 4 [Jatropha curcas]
17 Hb_000510_300 0.1190354541 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Jatropha curcas]
18 Hb_000783_010 0.1194462987 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]
19 Hb_005054_210 0.1230001872 - - hypothetical protein PRUPE_ppa026456mg [Prunus persica]
20 Hb_000362_190 0.1249675663 - - PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Jatropha curcas]

Gene co-expression network

sample Hb_004044_040 Hb_004044_040 Hb_008103_050 Hb_008103_050 Hb_004044_040--Hb_008103_050 Hb_007894_170 Hb_007894_170 Hb_004044_040--Hb_007894_170 Hb_000174_210 Hb_000174_210 Hb_004044_040--Hb_000174_210 Hb_076233_040 Hb_076233_040 Hb_004044_040--Hb_076233_040 Hb_000331_180 Hb_000331_180 Hb_004044_040--Hb_000331_180 Hb_006816_260 Hb_006816_260 Hb_004044_040--Hb_006816_260 Hb_000994_120 Hb_000994_120 Hb_008103_050--Hb_000994_120 Hb_000483_300 Hb_000483_300 Hb_008103_050--Hb_000483_300 Hb_001512_010 Hb_001512_010 Hb_008103_050--Hb_001512_010 Hb_004157_050 Hb_004157_050 Hb_008103_050--Hb_004157_050 Hb_066842_010 Hb_066842_010 Hb_008103_050--Hb_066842_010 Hb_028396_010 Hb_028396_010 Hb_007894_170--Hb_028396_010 Hb_003041_050 Hb_003041_050 Hb_007894_170--Hb_003041_050 Hb_000538_120 Hb_000538_120 Hb_007894_170--Hb_000538_120 Hb_000045_310 Hb_000045_310 Hb_007894_170--Hb_000045_310 Hb_001301_110 Hb_001301_110 Hb_007894_170--Hb_001301_110 Hb_007894_060 Hb_007894_060 Hb_007894_170--Hb_007894_060 Hb_005054_210 Hb_005054_210 Hb_000174_210--Hb_005054_210 Hb_002014_020 Hb_002014_020 Hb_000174_210--Hb_002014_020 Hb_003622_040 Hb_003622_040 Hb_000174_210--Hb_003622_040 Hb_000174_210--Hb_007894_170 Hb_000665_050 Hb_000665_050 Hb_000174_210--Hb_000665_050 Hb_006420_080 Hb_006420_080 Hb_000174_210--Hb_006420_080 Hb_008841_020 Hb_008841_020 Hb_076233_040--Hb_008841_020 Hb_003126_070 Hb_003126_070 Hb_076233_040--Hb_003126_070 Hb_000329_210 Hb_000329_210 Hb_076233_040--Hb_000329_210 Hb_010883_050 Hb_010883_050 Hb_076233_040--Hb_010883_050 Hb_076233_040--Hb_006420_080 Hb_076233_040--Hb_005054_210 Hb_000783_010 Hb_000783_010 Hb_000331_180--Hb_000783_010 Hb_000034_070 Hb_000034_070 Hb_000331_180--Hb_000034_070 Hb_032808_010 Hb_032808_010 Hb_000331_180--Hb_032808_010 Hb_001366_370 Hb_001366_370 Hb_000331_180--Hb_001366_370 Hb_000510_300 Hb_000510_300 Hb_000331_180--Hb_000510_300 Hb_002445_060 Hb_002445_060 Hb_000331_180--Hb_002445_060 Hb_001623_060 Hb_001623_060 Hb_006816_260--Hb_001623_060 Hb_006816_260--Hb_007894_170 Hb_006816_260--Hb_028396_010 Hb_001437_060 Hb_001437_060 Hb_006816_260--Hb_001437_060 Hb_006816_260--Hb_005054_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.0985 8.82322 32.679 47.0037 9.82149 24.9281
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
58.5887 33.8431 28.9964 32.8649 17.3222

CAGE analysis