Hb_004048_060

Information

Type -
Description -
Location Contig4048: 40593-43330
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023788mg
description hypothetical protein
nr
ID XP_007216787.1
description hypothetical protein PRUPE_ppa023788mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WXQ6
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023788mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004048_060 0.0 - - hypothetical protein PRUPE_ppa023788mg, partial [Prunus persica]
2 Hb_014497_110 0.1943980596 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]
3 Hb_000392_330 0.2027512028 - - PREDICTED: protein kinase 2B, chloroplastic-like [Jatropha curcas]
4 Hb_008516_020 0.216035179 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
5 Hb_002983_030 0.2223138148 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g046124mg, partial [Citrus sinensis]
6 Hb_000723_160 0.2239056838 transcription factor TF Family: TCP PREDICTED: transcription factor TCP11 [Jatropha curcas]
7 Hb_001005_070 0.2279174455 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
8 Hb_000029_270 0.2330215096 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
9 Hb_004333_020 0.2347228493 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
10 Hb_003086_130 0.2352764206 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
11 Hb_000500_140 0.2367199744 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 4 [Jatropha curcas]
12 Hb_025214_130 0.2391930853 - - PREDICTED: uncharacterized protein LOC105640854 [Jatropha curcas]
13 Hb_005914_070 0.2453997537 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003052_040 0.2501075443 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001396_220 0.2510805574 - - nuclear transport factor, putative [Ricinus communis]
16 Hb_001153_220 0.2511921573 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Jatropha curcas]
17 Hb_001012_040 0.251425044 - - PREDICTED: MADS-box transcription factor 23-like isoform X2 [Jatropha curcas]
18 Hb_002067_100 0.2516699725 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001959_160 0.25228151 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
20 Hb_004414_050 0.253054111 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_004048_060 Hb_004048_060 Hb_014497_110 Hb_014497_110 Hb_004048_060--Hb_014497_110 Hb_000392_330 Hb_000392_330 Hb_004048_060--Hb_000392_330 Hb_008516_020 Hb_008516_020 Hb_004048_060--Hb_008516_020 Hb_002983_030 Hb_002983_030 Hb_004048_060--Hb_002983_030 Hb_000723_160 Hb_000723_160 Hb_004048_060--Hb_000723_160 Hb_001005_070 Hb_001005_070 Hb_004048_060--Hb_001005_070 Hb_002260_090 Hb_002260_090 Hb_014497_110--Hb_002260_090 Hb_001213_120 Hb_001213_120 Hb_014497_110--Hb_001213_120 Hb_012366_020 Hb_012366_020 Hb_014497_110--Hb_012366_020 Hb_001012_040 Hb_001012_040 Hb_014497_110--Hb_001012_040 Hb_014497_110--Hb_002983_030 Hb_003052_040 Hb_003052_040 Hb_014497_110--Hb_003052_040 Hb_000392_330--Hb_008516_020 Hb_004333_020 Hb_004333_020 Hb_000392_330--Hb_004333_020 Hb_003086_130 Hb_003086_130 Hb_000392_330--Hb_003086_130 Hb_000375_340 Hb_000375_340 Hb_000392_330--Hb_000375_340 Hb_091433_040 Hb_091433_040 Hb_000392_330--Hb_091433_040 Hb_008516_020--Hb_003086_130 Hb_008516_020--Hb_091433_040 Hb_001534_170 Hb_001534_170 Hb_008516_020--Hb_001534_170 Hb_000951_040 Hb_000951_040 Hb_008516_020--Hb_000951_040 Hb_004453_140 Hb_004453_140 Hb_002983_030--Hb_004453_140 Hb_000193_240 Hb_000193_240 Hb_002983_030--Hb_000193_240 Hb_003060_030 Hb_003060_030 Hb_002983_030--Hb_003060_030 Hb_096225_020 Hb_096225_020 Hb_002983_030--Hb_096225_020 Hb_001143_090 Hb_001143_090 Hb_002983_030--Hb_001143_090 Hb_000003_050 Hb_000003_050 Hb_000723_160--Hb_000003_050 Hb_000196_090 Hb_000196_090 Hb_000723_160--Hb_000196_090 Hb_001619_080 Hb_001619_080 Hb_000723_160--Hb_001619_080 Hb_006816_450 Hb_006816_450 Hb_000723_160--Hb_006816_450 Hb_000436_010 Hb_000436_010 Hb_000723_160--Hb_000436_010 Hb_001329_210 Hb_001329_210 Hb_000723_160--Hb_001329_210 Hb_001005_070--Hb_006816_450 Hb_003096_030 Hb_003096_030 Hb_001005_070--Hb_003096_030 Hb_001005_070--Hb_000723_160 Hb_001538_140 Hb_001538_140 Hb_001005_070--Hb_001538_140 Hb_014549_020 Hb_014549_020 Hb_001005_070--Hb_014549_020 Hb_007753_010 Hb_007753_010 Hb_001005_070--Hb_007753_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.118694 0.0440405 0 0 0 0.13106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.120932 0.237747 0.346543 0.0575821 0

CAGE analysis