Hb_004052_130

Information

Type -
Description -
Location Contig4052: 143996-146409
Sequence    

Annotation

kegg
ID pxb:103930433
description cytochrome P450 78A5-like
nr
ID XP_012080408.1
description PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
swissprot
ID Q9LMX7
description Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1
trembl
ID A0A067KGI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11746 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40198: 145528-146019
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004052_130 0.0 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
2 Hb_004445_030 0.1106241156 - - conserved hypothetical protein [Ricinus communis]
3 Hb_009355_010 0.1134200455 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]
4 Hb_000311_130 0.1135496804 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
5 Hb_010623_010 0.1136937843 - - PREDICTED: uncharacterized protein LOC105643732 [Jatropha curcas]
6 Hb_000710_100 0.1137660283 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
7 Hb_002260_210 0.1171937453 - - unnamed protein product [Vitis vinifera]
8 Hb_000108_030 0.1172007746 - - -
9 Hb_152483_010 0.1175584919 - - hypothetical protein JCGZ_22450 [Jatropha curcas]
10 Hb_041711_040 0.1179189688 - - hypothetical protein, partial [Pseudomonas fluorescens]
11 Hb_039164_010 0.1180003669 - - -
12 Hb_000629_090 0.1180880769 - - hypothetical protein JCGZ_09480 [Jatropha curcas]
13 Hb_004683_030 0.1185496111 - - PREDICTED: uncharacterized protein LOC105778947 [Gossypium raimondii]
14 Hb_003625_030 0.1187631804 - - retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group]
15 Hb_000710_110 0.1196209314 - - Vps51/Vps67 [Citrus endogenous pararetrovirus]
16 Hb_006221_020 0.1214584773 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
17 Hb_008680_010 0.1249340476 - - -
18 Hb_006663_080 0.1252826552 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
19 Hb_010023_020 0.1302519829 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_006617_030 0.1303178859 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]

Gene co-expression network

sample Hb_004052_130 Hb_004052_130 Hb_004445_030 Hb_004445_030 Hb_004052_130--Hb_004445_030 Hb_009355_010 Hb_009355_010 Hb_004052_130--Hb_009355_010 Hb_000311_130 Hb_000311_130 Hb_004052_130--Hb_000311_130 Hb_010623_010 Hb_010623_010 Hb_004052_130--Hb_010623_010 Hb_000710_100 Hb_000710_100 Hb_004052_130--Hb_000710_100 Hb_002260_210 Hb_002260_210 Hb_004052_130--Hb_002260_210 Hb_054127_020 Hb_054127_020 Hb_004445_030--Hb_054127_020 Hb_047923_030 Hb_047923_030 Hb_004445_030--Hb_047923_030 Hb_002576_010 Hb_002576_010 Hb_004445_030--Hb_002576_010 Hb_004445_030--Hb_009355_010 Hb_144838_010 Hb_144838_010 Hb_004445_030--Hb_144838_010 Hb_027917_010 Hb_027917_010 Hb_009355_010--Hb_027917_010 Hb_004375_020 Hb_004375_020 Hb_009355_010--Hb_004375_020 Hb_000373_140 Hb_000373_140 Hb_009355_010--Hb_000373_140 Hb_004987_040 Hb_004987_040 Hb_009355_010--Hb_004987_040 Hb_000311_130--Hb_010623_010 Hb_000311_130--Hb_000710_100 Hb_152483_010 Hb_152483_010 Hb_000311_130--Hb_152483_010 Hb_041711_040 Hb_041711_040 Hb_000311_130--Hb_041711_040 Hb_039164_010 Hb_039164_010 Hb_000311_130--Hb_039164_010 Hb_000629_090 Hb_000629_090 Hb_000311_130--Hb_000629_090 Hb_010623_010--Hb_000710_100 Hb_010623_010--Hb_152483_010 Hb_010623_010--Hb_041711_040 Hb_010623_010--Hb_039164_010 Hb_010623_010--Hb_000629_090 Hb_000710_100--Hb_152483_010 Hb_000710_100--Hb_041711_040 Hb_000710_100--Hb_039164_010 Hb_000710_100--Hb_000629_090 Hb_000108_030 Hb_000108_030 Hb_002260_210--Hb_000108_030 Hb_000710_110 Hb_000710_110 Hb_002260_210--Hb_000710_110 Hb_006221_020 Hb_006221_020 Hb_002260_210--Hb_006221_020 Hb_002260_210--Hb_000311_130 Hb_010023_020 Hb_010023_020 Hb_002260_210--Hb_010023_020 Hb_006617_030 Hb_006617_030 Hb_002260_210--Hb_006617_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.44678 0.0321222 0.0152956 0.0727229 0.0206899
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.167205 10.3082

CAGE analysis