Hb_004055_020

Information

Type -
Description -
Location Contig4055: 11592-11942
Sequence    

Annotation

kegg
ID rcu:RCOM_0654960
description hypothetical protein
nr
ID XP_012068943.1
description PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9J8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24743 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004055_020 0.0 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
2 Hb_000950_030 0.1275555277 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
3 Hb_002157_270 0.1336130669 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
4 Hb_000107_350 0.1419237209 - - PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]
5 Hb_000806_130 0.1504423118 - - Adenosine kinase 2 [Theobroma cacao]
6 Hb_026527_010 0.1507587724 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
7 Hb_000077_100 0.1549768638 - - PREDICTED: mannan endo-1,4-beta-mannosidase 2-like isoform X1 [Jatropha curcas]
8 Hb_011310_040 0.1642455845 transcription factor TF Family: bZIP transcription factor hy5, putative [Ricinus communis]
9 Hb_012707_010 0.1646254381 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
10 Hb_000246_130 0.1651958855 - - tubulin alpha chain, putative [Ricinus communis]
11 Hb_001329_180 0.1653465605 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
12 Hb_020805_140 0.168918204 - - PREDICTED: F-box/kelch-repeat protein At5g42360-like [Jatropha curcas]
13 Hb_002596_080 0.1734889461 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
14 Hb_000417_380 0.1735027217 - - SecY protein transport family protein [Theobroma cacao]
15 Hb_000649_040 0.1736067626 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
16 Hb_000696_070 0.1742531271 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
17 Hb_000920_160 0.1744092101 - - annexin [Manihot esculenta]
18 Hb_000820_110 0.1744539697 - - UDP-XYL synthase 6 isoform 1 [Theobroma cacao]
19 Hb_030565_100 0.17463771 - - serine hydroxymethyltransferase, putative [Ricinus communis]
20 Hb_000236_180 0.1751206673 - - serine hydroxymethyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_004055_020 Hb_004055_020 Hb_000950_030 Hb_000950_030 Hb_004055_020--Hb_000950_030 Hb_002157_270 Hb_002157_270 Hb_004055_020--Hb_002157_270 Hb_000107_350 Hb_000107_350 Hb_004055_020--Hb_000107_350 Hb_000806_130 Hb_000806_130 Hb_004055_020--Hb_000806_130 Hb_026527_010 Hb_026527_010 Hb_004055_020--Hb_026527_010 Hb_000077_100 Hb_000077_100 Hb_004055_020--Hb_000077_100 Hb_000950_030--Hb_002157_270 Hb_012707_010 Hb_012707_010 Hb_000950_030--Hb_012707_010 Hb_000950_030--Hb_000806_130 Hb_001486_350 Hb_001486_350 Hb_000950_030--Hb_001486_350 Hb_006634_110 Hb_006634_110 Hb_000950_030--Hb_006634_110 Hb_011310_040 Hb_011310_040 Hb_002157_270--Hb_011310_040 Hb_002129_020 Hb_002129_020 Hb_002157_270--Hb_002129_020 Hb_002596_080 Hb_002596_080 Hb_002157_270--Hb_002596_080 Hb_001493_060 Hb_001493_060 Hb_002157_270--Hb_001493_060 Hb_002164_020 Hb_002164_020 Hb_002157_270--Hb_002164_020 Hb_000649_040 Hb_000649_040 Hb_000107_350--Hb_000649_040 Hb_000077_310 Hb_000077_310 Hb_000107_350--Hb_000077_310 Hb_000107_350--Hb_011310_040 Hb_000808_150 Hb_000808_150 Hb_000107_350--Hb_000808_150 Hb_003226_250 Hb_003226_250 Hb_000107_350--Hb_003226_250 Hb_000806_130--Hb_001486_350 Hb_001329_180 Hb_001329_180 Hb_000806_130--Hb_001329_180 Hb_000696_070 Hb_000696_070 Hb_000806_130--Hb_000696_070 Hb_000236_190 Hb_000236_190 Hb_000806_130--Hb_000236_190 Hb_001119_070 Hb_001119_070 Hb_000806_130--Hb_001119_070 Hb_000300_420 Hb_000300_420 Hb_000806_130--Hb_000300_420 Hb_026527_010--Hb_001329_180 Hb_026527_010--Hb_000696_070 Hb_003470_110 Hb_003470_110 Hb_026527_010--Hb_003470_110 Hb_020805_140 Hb_020805_140 Hb_026527_010--Hb_020805_140 Hb_002701_090 Hb_002701_090 Hb_026527_010--Hb_002701_090 Hb_002781_050 Hb_002781_050 Hb_026527_010--Hb_002781_050 Hb_030565_100 Hb_030565_100 Hb_000077_100--Hb_030565_100 Hb_000236_180 Hb_000236_180 Hb_000077_100--Hb_000236_180 Hb_029223_040 Hb_029223_040 Hb_000077_100--Hb_029223_040 Hb_000820_110 Hb_000820_110 Hb_000077_100--Hb_000820_110 Hb_000193_210 Hb_000193_210 Hb_000077_100--Hb_000193_210 Hb_000580_110 Hb_000580_110 Hb_000077_100--Hb_000580_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.37919 0.293019 5.33659 26.3361 0.41221 1.40362
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.85793 1.02092 2.18442 3.98039 11.9446

CAGE analysis