Hb_004079_110

Information

Type -
Description -
Location Contig4079: 75812-77370
Sequence    

Annotation

kegg
ID vvi:100257802
description uncharacterized LOC100257802
nr
ID XP_002281062.2
description PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID D7TBP5
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04000 PE=4 SV=1
Gene Ontology
ID GO:0016021
description PREDICTED: uncharacterized protein LOC100257802

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004079_110 0.0 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
2 Hb_009778_050 0.094789583 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
3 Hb_006949_030 0.1072678034 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
4 Hb_001660_040 0.1164590366 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
5 Hb_001723_070 0.1171654237 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
6 Hb_001621_020 0.1186010093 - - -
7 Hb_001609_080 0.1223638178 - - hypothetical protein POPTR_0017s05660g [Populus trichocarpa]
8 Hb_000288_140 0.1254678358 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 35 [Jatropha curcas]
9 Hb_000254_040 0.1258971663 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
10 Hb_005010_040 0.1287302896 - - PREDICTED: uncharacterized protein LOC105630824 [Jatropha curcas]
11 Hb_150730_010 0.1303418025 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
12 Hb_002686_390 0.1312192953 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
13 Hb_002960_010 0.1329584181 - - Zeamatin precursor, putative [Ricinus communis]
14 Hb_162286_030 0.1329604677 - - PREDICTED: uncharacterized protein LOC105650163 [Jatropha curcas]
15 Hb_001331_040 0.1385444596 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
16 Hb_002003_030 0.1398736033 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
17 Hb_020902_020 0.1478580868 - - hypothetical protein JCGZ_07820 [Jatropha curcas]
18 Hb_001006_200 0.1507991011 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
19 Hb_000381_030 0.1509067175 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
20 Hb_002811_330 0.1520083463 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]

Gene co-expression network

sample Hb_004079_110 Hb_004079_110 Hb_009778_050 Hb_009778_050 Hb_004079_110--Hb_009778_050 Hb_006949_030 Hb_006949_030 Hb_004079_110--Hb_006949_030 Hb_001660_040 Hb_001660_040 Hb_004079_110--Hb_001660_040 Hb_001723_070 Hb_001723_070 Hb_004079_110--Hb_001723_070 Hb_001621_020 Hb_001621_020 Hb_004079_110--Hb_001621_020 Hb_001609_080 Hb_001609_080 Hb_004079_110--Hb_001609_080 Hb_150730_010 Hb_150730_010 Hb_009778_050--Hb_150730_010 Hb_002003_030 Hb_002003_030 Hb_009778_050--Hb_002003_030 Hb_009778_050--Hb_001723_070 Hb_116469_010 Hb_116469_010 Hb_009778_050--Hb_116469_010 Hb_011861_020 Hb_011861_020 Hb_009778_050--Hb_011861_020 Hb_001331_040 Hb_001331_040 Hb_006949_030--Hb_001331_040 Hb_000381_030 Hb_000381_030 Hb_006949_030--Hb_000381_030 Hb_006938_010 Hb_006938_010 Hb_006949_030--Hb_006938_010 Hb_006949_030--Hb_001621_020 Hb_000010_200 Hb_000010_200 Hb_006949_030--Hb_000010_200 Hb_002686_390 Hb_002686_390 Hb_006949_030--Hb_002686_390 Hb_000288_140 Hb_000288_140 Hb_001660_040--Hb_000288_140 Hb_000005_350 Hb_000005_350 Hb_001660_040--Hb_000005_350 Hb_010334_040 Hb_010334_040 Hb_001660_040--Hb_010334_040 Hb_005211_090 Hb_005211_090 Hb_001660_040--Hb_005211_090 Hb_000025_740 Hb_000025_740 Hb_001660_040--Hb_000025_740 Hb_001660_040--Hb_011861_020 Hb_162286_030 Hb_162286_030 Hb_001723_070--Hb_162286_030 Hb_010174_170 Hb_010174_170 Hb_001723_070--Hb_010174_170 Hb_002110_060 Hb_002110_060 Hb_001723_070--Hb_002110_060 Hb_001723_070--Hb_001621_020 Hb_001355_110 Hb_001355_110 Hb_001621_020--Hb_001355_110 Hb_001102_270 Hb_001102_270 Hb_001621_020--Hb_001102_270 Hb_001621_020--Hb_162286_030 Hb_001266_020 Hb_001266_020 Hb_001621_020--Hb_001266_020 Hb_005653_100 Hb_005653_100 Hb_001609_080--Hb_005653_100 Hb_000407_110 Hb_000407_110 Hb_001609_080--Hb_000407_110 Hb_006919_010 Hb_006919_010 Hb_001609_080--Hb_006919_010 Hb_020902_020 Hb_020902_020 Hb_001609_080--Hb_020902_020 Hb_001609_080--Hb_000288_140 Hb_111693_010 Hb_111693_010 Hb_001609_080--Hb_111693_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 19.6613 18.9751 5.84841 0.14221 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0923928 0 54.3174 4.39243

CAGE analysis