Hb_004096_040

Information

Type -
Description -
Location Contig4096: 37635-40473
Sequence    

Annotation

kegg
ID rcu:RCOM_1725340
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002516723.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9FF18
description Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A1 PE=1 SV=1
trembl
ID B9RSK4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1725340 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytokinin hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004096_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000395_160 0.0710221253 - - hypothetical protein POPTR_0006s25490g [Populus trichocarpa]
3 Hb_186671_020 0.0744897024 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_163950_060 0.0768688235 - - multidrug resistance pump, putative [Ricinus communis]
5 Hb_005687_020 0.0802079684 - - P66 protein [Hevea brasiliensis]
6 Hb_000979_270 0.0840068619 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
7 Hb_000876_060 0.088872054 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001796_010 0.0912431283 - - purine transporter, putative [Ricinus communis]
9 Hb_005529_050 0.0937771692 - - PREDICTED: cytochrome P450 94B3-like [Nelumbo nucifera]
10 Hb_011980_020 0.098021577 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000004_150 0.09811278 - - hypothetical protein RCOM_1382630 [Ricinus communis]
12 Hb_000007_170 0.09811278 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
13 Hb_000010_280 0.09811278 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
14 Hb_000022_220 0.09811278 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
15 Hb_000045_120 0.09811278 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
16 Hb_000056_320 0.09811278 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_000066_110 0.09811278 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
18 Hb_000072_270 0.09811278 - - JHL22C18.10 [Jatropha curcas]
19 Hb_000078_110 0.09811278 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
20 Hb_000081_190 0.09811278 - - -

Gene co-expression network

sample Hb_004096_040 Hb_004096_040 Hb_000395_160 Hb_000395_160 Hb_004096_040--Hb_000395_160 Hb_186671_020 Hb_186671_020 Hb_004096_040--Hb_186671_020 Hb_163950_060 Hb_163950_060 Hb_004096_040--Hb_163950_060 Hb_005687_020 Hb_005687_020 Hb_004096_040--Hb_005687_020 Hb_000979_270 Hb_000979_270 Hb_004096_040--Hb_000979_270 Hb_000876_060 Hb_000876_060 Hb_004096_040--Hb_000876_060 Hb_000395_160--Hb_000979_270 Hb_000395_160--Hb_005687_020 Hb_000004_150 Hb_000004_150 Hb_000395_160--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_000395_160--Hb_000007_170 Hb_000010_280 Hb_000010_280 Hb_000395_160--Hb_000010_280 Hb_000022_220 Hb_000022_220 Hb_000395_160--Hb_000022_220 Hb_001796_010 Hb_001796_010 Hb_186671_020--Hb_001796_010 Hb_186671_020--Hb_163950_060 Hb_018609_010 Hb_018609_010 Hb_186671_020--Hb_018609_010 Hb_005050_010 Hb_005050_010 Hb_186671_020--Hb_005050_010 Hb_186671_020--Hb_000395_160 Hb_186671_020--Hb_000979_270 Hb_011980_020 Hb_011980_020 Hb_163950_060--Hb_011980_020 Hb_000336_170 Hb_000336_170 Hb_163950_060--Hb_000336_170 Hb_007943_040 Hb_007943_040 Hb_163950_060--Hb_007943_040 Hb_008978_010 Hb_008978_010 Hb_163950_060--Hb_008978_010 Hb_163950_060--Hb_005687_020 Hb_005687_020--Hb_011980_020 Hb_005687_020--Hb_186671_020 Hb_005687_020--Hb_001796_010 Hb_000979_270--Hb_005050_010 Hb_000979_270--Hb_000004_150 Hb_000979_270--Hb_000007_170 Hb_000979_270--Hb_000010_280 Hb_000979_270--Hb_000022_220 Hb_000045_120 Hb_000045_120 Hb_000979_270--Hb_000045_120 Hb_000846_020 Hb_000846_020 Hb_000876_060--Hb_000846_020 Hb_002864_040 Hb_002864_040 Hb_000876_060--Hb_002864_040 Hb_005529_050 Hb_005529_050 Hb_000876_060--Hb_005529_050 Hb_015473_020 Hb_015473_020 Hb_000876_060--Hb_015473_020 Hb_001821_070 Hb_001821_070 Hb_000876_060--Hb_001821_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.41856 0.0102409 0.0508156 0.0122233 0.0129843
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00932888 0.049008

CAGE analysis