Hb_004096_060

Information

Type -
Description -
Location Contig4096: 84586-87933
Sequence    

Annotation

kegg
ID cit:102614354
description probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like
nr
ID XP_012077968.1
description PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
swissprot
ID Q9FF17
description Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Arabidopsis thaliana GN=At5g38460 PE=2 SV=1
trembl
ID A0A067K9N2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12977 PE=4 SV=1
Gene Ontology
ID GO:0005789
description probable dolichyl pyrophosphate man9 c2 alpha- -glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40418: 52325-87186
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004096_060 0.0 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
2 Hb_004032_370 0.0603886472 - - pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
3 Hb_033642_040 0.0647132106 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
4 Hb_025668_010 0.0735853204 - - unnamed protein product [Coffea canephora]
5 Hb_000724_020 0.0786773662 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
6 Hb_001002_060 0.0787460436 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
7 Hb_002326_110 0.0805376499 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
8 Hb_016347_020 0.084755472 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X1 [Populus euphratica]
9 Hb_077026_010 0.0904097152 - - PREDICTED: phosphatidylinositol 4-kinase alpha 2 [Jatropha curcas]
10 Hb_000847_080 0.0908291735 - - PREDICTED: HAUS augmin-like complex subunit 3 [Jatropha curcas]
11 Hb_000261_210 0.0910256192 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
12 Hb_000963_040 0.0912988653 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
13 Hb_030982_010 0.0920229915 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001931_030 0.0930688065 - - PREDICTED: T-complex protein 1 subunit eta-like [Nelumbo nucifera]
15 Hb_002811_270 0.0945689252 - - PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Jatropha curcas]
16 Hb_000154_050 0.094704496 - - CMP-sialic acid transporter, putative [Ricinus communis]
17 Hb_016777_040 0.095273097 - - PREDICTED: DNA polymerase eta-like [Jatropha curcas]
18 Hb_005064_010 0.0955465824 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
19 Hb_000373_080 0.0969222425 - - PREDICTED: serine decarboxylase [Jatropha curcas]
20 Hb_021943_080 0.0969246508 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004096_060 Hb_004096_060 Hb_004032_370 Hb_004032_370 Hb_004096_060--Hb_004032_370 Hb_033642_040 Hb_033642_040 Hb_004096_060--Hb_033642_040 Hb_025668_010 Hb_025668_010 Hb_004096_060--Hb_025668_010 Hb_000724_020 Hb_000724_020 Hb_004096_060--Hb_000724_020 Hb_001002_060 Hb_001002_060 Hb_004096_060--Hb_001002_060 Hb_002326_110 Hb_002326_110 Hb_004096_060--Hb_002326_110 Hb_004032_370--Hb_000724_020 Hb_002870_020 Hb_002870_020 Hb_004032_370--Hb_002870_020 Hb_003228_100 Hb_003228_100 Hb_004032_370--Hb_003228_100 Hb_004032_370--Hb_002326_110 Hb_077026_010 Hb_077026_010 Hb_004032_370--Hb_077026_010 Hb_000098_240 Hb_000098_240 Hb_033642_040--Hb_000098_240 Hb_000175_410 Hb_000175_410 Hb_033642_040--Hb_000175_410 Hb_000820_150 Hb_000820_150 Hb_033642_040--Hb_000820_150 Hb_016777_040 Hb_016777_040 Hb_033642_040--Hb_016777_040 Hb_008397_010 Hb_008397_010 Hb_033642_040--Hb_008397_010 Hb_023313_040 Hb_023313_040 Hb_025668_010--Hb_023313_040 Hb_025668_010--Hb_001002_060 Hb_005730_010 Hb_005730_010 Hb_025668_010--Hb_005730_010 Hb_002942_210 Hb_002942_210 Hb_025668_010--Hb_002942_210 Hb_000261_210 Hb_000261_210 Hb_025668_010--Hb_000261_210 Hb_004109_120 Hb_004109_120 Hb_000724_020--Hb_004109_120 Hb_001053_190 Hb_001053_190 Hb_000724_020--Hb_001053_190 Hb_000724_020--Hb_003228_100 Hb_000579_080 Hb_000579_080 Hb_000724_020--Hb_000579_080 Hb_001002_060--Hb_023313_040 Hb_000362_170 Hb_000362_170 Hb_001002_060--Hb_000362_170 Hb_000737_030 Hb_000737_030 Hb_001002_060--Hb_000737_030 Hb_001002_060--Hb_000261_210 Hb_005895_010 Hb_005895_010 Hb_001002_060--Hb_005895_010 Hb_005649_100 Hb_005649_100 Hb_002326_110--Hb_005649_100 Hb_000085_170 Hb_000085_170 Hb_002326_110--Hb_000085_170 Hb_000317_510 Hb_000317_510 Hb_002326_110--Hb_000317_510 Hb_000847_080 Hb_000847_080 Hb_002326_110--Hb_000847_080 Hb_000373_080 Hb_000373_080 Hb_002326_110--Hb_000373_080 Hb_002909_040 Hb_002909_040 Hb_002326_110--Hb_002909_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.31169 5.49839 15.2758 11.4517 8.17049 6.28456
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.83502 2.59391 3.8193 8.10451 8.48979

CAGE analysis