Hb_004097_130

Information

Type -
Description -
Location Contig4097: 159072-174047
Sequence    

Annotation

kegg
ID rcu:RCOM_1382770
description Inositol-tetrakisphosphate 1-kinase, putative (EC:2.7.1.134)
nr
ID XP_002522099.1
description Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
swissprot
ID Q10PL5
description Inositol-tetrakisphosphate 1-kinase 2 OS=Oryza sativa subsp. japonica GN=ITPK2 PE=2 SV=1
trembl
ID B9S7Y3
description Inositol-tetrakisphosphate 1-kinase OS=Ricinus communis GN=RCOM_1382770 PE=3 SV=1
Gene Ontology
ID GO:0005622
description inositol-tetrakisphosphate 1-kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40461: 159450-159584 , PASA_asmbl_40463: 161385-162164 , PASA_asmbl_40464: 170328-170487 , PASA_asmbl_40465: 170488-173886
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004097_130 0.0 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
2 Hb_001472_060 0.084045369 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Jatropha curcas]
3 Hb_003531_080 0.0855744149 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
4 Hb_154471_020 0.0876068378 - - squalene synthetase [Euphorbia tirucalli]
5 Hb_000103_480 0.09291542 - - -
6 Hb_000635_090 0.0962550261 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
7 Hb_003688_040 0.1059491072 - - -
8 Hb_001700_010 0.1092018581 - - PREDICTED: GTP-binding protein At2g22870 [Jatropha curcas]
9 Hb_171215_010 0.1123046091 - - vesicle-associated membrane protein, putative [Ricinus communis]
10 Hb_170416_010 0.1133346548 - - PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Jatropha curcas]
11 Hb_000212_190 0.1133560329 - - PREDICTED: phospholipase A(1) LCAT3 isoform X1 [Jatropha curcas]
12 Hb_001518_080 0.1135301125 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646545 [Jatropha curcas]
13 Hb_001761_120 0.1136239636 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
14 Hb_000317_040 0.1144922669 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
15 Hb_000103_530 0.1150795029 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
16 Hb_003363_070 0.1164286535 - - -
17 Hb_001863_360 0.1173688305 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
18 Hb_007533_040 0.1181363168 - - protein phosphatase 2c, putative [Ricinus communis]
19 Hb_000103_340 0.120315331 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
20 Hb_003430_050 0.1204933477 - - PREDICTED: serine/arginine-rich splicing factor RSZ21A isoform X1 [Phoenix dactylifera]

Gene co-expression network

sample Hb_004097_130 Hb_004097_130 Hb_001472_060 Hb_001472_060 Hb_004097_130--Hb_001472_060 Hb_003531_080 Hb_003531_080 Hb_004097_130--Hb_003531_080 Hb_154471_020 Hb_154471_020 Hb_004097_130--Hb_154471_020 Hb_000103_480 Hb_000103_480 Hb_004097_130--Hb_000103_480 Hb_000635_090 Hb_000635_090 Hb_004097_130--Hb_000635_090 Hb_003688_040 Hb_003688_040 Hb_004097_130--Hb_003688_040 Hb_001472_060--Hb_003531_080 Hb_021409_180 Hb_021409_180 Hb_001472_060--Hb_021409_180 Hb_000808_050 Hb_000808_050 Hb_001472_060--Hb_000808_050 Hb_001205_120 Hb_001205_120 Hb_001472_060--Hb_001205_120 Hb_000019_150 Hb_000019_150 Hb_001472_060--Hb_000019_150 Hb_001761_120 Hb_001761_120 Hb_003531_080--Hb_001761_120 Hb_170416_010 Hb_170416_010 Hb_003531_080--Hb_170416_010 Hb_007007_120 Hb_007007_120 Hb_003531_080--Hb_007007_120 Hb_000340_420 Hb_000340_420 Hb_003531_080--Hb_000340_420 Hb_007290_030 Hb_007290_030 Hb_003531_080--Hb_007290_030 Hb_002304_150 Hb_002304_150 Hb_154471_020--Hb_002304_150 Hb_154471_020--Hb_003531_080 Hb_006132_090 Hb_006132_090 Hb_154471_020--Hb_006132_090 Hb_062226_130 Hb_062226_130 Hb_154471_020--Hb_062226_130 Hb_002754_010 Hb_002754_010 Hb_154471_020--Hb_002754_010 Hb_001700_010 Hb_001700_010 Hb_000103_480--Hb_001700_010 Hb_000103_480--Hb_001472_060 Hb_000103_530 Hb_000103_530 Hb_000103_480--Hb_000103_530 Hb_008165_060 Hb_008165_060 Hb_000103_480--Hb_008165_060 Hb_001322_140 Hb_001322_140 Hb_000103_480--Hb_001322_140 Hb_001518_080 Hb_001518_080 Hb_000635_090--Hb_001518_080 Hb_002027_080 Hb_002027_080 Hb_000635_090--Hb_002027_080 Hb_000103_340 Hb_000103_340 Hb_000635_090--Hb_000103_340 Hb_006913_020 Hb_006913_020 Hb_000635_090--Hb_006913_020 Hb_000270_190 Hb_000270_190 Hb_000635_090--Hb_000270_190 Hb_000773_040 Hb_000773_040 Hb_000635_090--Hb_000773_040 Hb_002485_030 Hb_002485_030 Hb_003688_040--Hb_002485_030 Hb_000108_050 Hb_000108_050 Hb_003688_040--Hb_000108_050 Hb_024836_010 Hb_024836_010 Hb_003688_040--Hb_024836_010 Hb_000022_190 Hb_000022_190 Hb_003688_040--Hb_000022_190 Hb_003688_040--Hb_000635_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.56611 3.34506 6.69667 5.23827 1.69615 4.59686
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.85712 2.55383 6.12679 2.81287 5.19853

CAGE analysis