Hb_004098_010

Information

Type -
Description -
Location Contig4098: 923-7175
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004098_010 0.0 - - -
2 Hb_000128_010 0.0411805411 - - dimethylaniline monooxygenase, putative [Ricinus communis]
3 Hb_000369_150 0.0462002139 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
4 Hb_176149_010 0.0565431878 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
5 Hb_119441_010 0.0629236021 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
6 Hb_001510_050 0.0845325875 - - zinc finger protein, putative [Ricinus communis]
7 Hb_006351_080 0.0960317983 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
8 Hb_004586_380 0.0975930303 - - purine transporter, putative [Ricinus communis]
9 Hb_133646_010 0.1017555936 - - hypothetical protein RCOM_1044030 [Ricinus communis]
10 Hb_000656_360 0.1042066935 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
11 Hb_001331_050 0.1071500665 - - hypothetical protein VITISV_022439 [Vitis vinifera]
12 Hb_005643_010 0.1110674955 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
13 Hb_000879_100 0.1141450782 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
14 Hb_007371_010 0.1233493331 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
15 Hb_066262_010 0.1296345313 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
16 Hb_000627_140 0.1316835633 - - ATP binding protein, putative [Ricinus communis]
17 Hb_005163_010 0.1356934074 - - PREDICTED: probable terpene synthase 11 [Jatropha curcas]
18 Hb_003847_140 0.1366115907 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
19 Hb_029866_140 0.1370626094 - - PREDICTED: hevamine-A [Jatropha curcas]
20 Hb_017417_020 0.1452316174 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004098_010 Hb_004098_010 Hb_000128_010 Hb_000128_010 Hb_004098_010--Hb_000128_010 Hb_000369_150 Hb_000369_150 Hb_004098_010--Hb_000369_150 Hb_176149_010 Hb_176149_010 Hb_004098_010--Hb_176149_010 Hb_119441_010 Hb_119441_010 Hb_004098_010--Hb_119441_010 Hb_001510_050 Hb_001510_050 Hb_004098_010--Hb_001510_050 Hb_006351_080 Hb_006351_080 Hb_004098_010--Hb_006351_080 Hb_000128_010--Hb_176149_010 Hb_000128_010--Hb_006351_080 Hb_000128_010--Hb_000369_150 Hb_004586_380 Hb_004586_380 Hb_000128_010--Hb_004586_380 Hb_000128_010--Hb_119441_010 Hb_000369_150--Hb_119441_010 Hb_000879_100 Hb_000879_100 Hb_000369_150--Hb_000879_100 Hb_000369_150--Hb_176149_010 Hb_005643_010 Hb_005643_010 Hb_000369_150--Hb_005643_010 Hb_176149_010--Hb_004586_380 Hb_176149_010--Hb_006351_080 Hb_000656_360 Hb_000656_360 Hb_176149_010--Hb_000656_360 Hb_119441_010--Hb_005643_010 Hb_001331_050 Hb_001331_050 Hb_119441_010--Hb_001331_050 Hb_119441_010--Hb_000879_100 Hb_007371_010 Hb_007371_010 Hb_001510_050--Hb_007371_010 Hb_001510_050--Hb_000369_150 Hb_133646_010 Hb_133646_010 Hb_001510_050--Hb_133646_010 Hb_001510_050--Hb_176149_010 Hb_001510_050--Hb_000128_010 Hb_006351_080--Hb_004586_380 Hb_006351_080--Hb_001331_050 Hb_006351_080--Hb_119441_010 Hb_045810_010 Hb_045810_010 Hb_006351_080--Hb_045810_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.207848 0 0.0292346 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0245697 0

CAGE analysis