Hb_004108_190

Information

Type -
Description -
Location Contig4108: 144875-148937
Sequence    

Annotation

kegg
ID rcu:RCOM_0176270
description hypothetical protein
nr
ID XP_012092489.1
description PREDICTED: protein catecholamines up-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JPM6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21960 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004108_190 0.0 - - PREDICTED: protein catecholamines up-like [Jatropha curcas]
2 Hb_002028_280 0.1619935676 - - hypothetical protein RCOM_1397400 [Ricinus communis]
3 Hb_114271_010 0.1755528806 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
4 Hb_000215_230 0.1946792621 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
5 Hb_024066_040 0.1970835654 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
6 Hb_004954_020 0.2120198476 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
7 Hb_000392_210 0.2178663968 transcription factor TF Family: TCP hypothetical protein POPTR_0004s04600g [Populus trichocarpa]
8 Hb_034507_050 0.2208988621 - - PREDICTED: uncharacterized protein LOC105646633 isoform X2 [Jatropha curcas]
9 Hb_004242_090 0.2222164461 - - hypothetical protein JCGZ_00767 [Jatropha curcas]
10 Hb_000373_200 0.2243024264 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Populus euphratica]
11 Hb_004531_170 0.2255139702 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
12 Hb_001728_110 0.2261648298 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF039-like [Jatropha curcas]
13 Hb_010050_040 0.2291690996 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
14 Hb_032260_110 0.2292483316 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000152_530 0.2293304028 - - hypothetical protein SELMODRAFT_231485 [Selaginella moellendorffii]
16 Hb_032264_050 0.2346777072 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
17 Hb_002542_060 0.2351968811 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
18 Hb_002244_020 0.2368030407 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
19 Hb_011994_070 0.2373672997 - - PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas]
20 Hb_019333_010 0.2386140312 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]

Gene co-expression network

sample Hb_004108_190 Hb_004108_190 Hb_002028_280 Hb_002028_280 Hb_004108_190--Hb_002028_280 Hb_114271_010 Hb_114271_010 Hb_004108_190--Hb_114271_010 Hb_000215_230 Hb_000215_230 Hb_004108_190--Hb_000215_230 Hb_024066_040 Hb_024066_040 Hb_004108_190--Hb_024066_040 Hb_004954_020 Hb_004954_020 Hb_004108_190--Hb_004954_020 Hb_000392_210 Hb_000392_210 Hb_004108_190--Hb_000392_210 Hb_000061_440 Hb_000061_440 Hb_002028_280--Hb_000061_440 Hb_002244_020 Hb_002244_020 Hb_002028_280--Hb_002244_020 Hb_002400_260 Hb_002400_260 Hb_002028_280--Hb_002400_260 Hb_004117_370 Hb_004117_370 Hb_002028_280--Hb_004117_370 Hb_003654_020 Hb_003654_020 Hb_002028_280--Hb_003654_020 Hb_032260_110 Hb_032260_110 Hb_114271_010--Hb_032260_110 Hb_032733_020 Hb_032733_020 Hb_114271_010--Hb_032733_020 Hb_129420_010 Hb_129420_010 Hb_114271_010--Hb_129420_010 Hb_013420_060 Hb_013420_060 Hb_114271_010--Hb_013420_060 Hb_002005_050 Hb_002005_050 Hb_114271_010--Hb_002005_050 Hb_000215_230--Hb_024066_040 Hb_001195_250 Hb_001195_250 Hb_000215_230--Hb_001195_250 Hb_000574_320 Hb_000574_320 Hb_000215_230--Hb_000574_320 Hb_003786_010 Hb_003786_010 Hb_000215_230--Hb_003786_010 Hb_000069_500 Hb_000069_500 Hb_000215_230--Hb_000069_500 Hb_000891_010 Hb_000891_010 Hb_000215_230--Hb_000891_010 Hb_034507_050 Hb_034507_050 Hb_024066_040--Hb_034507_050 Hb_024066_040--Hb_000069_500 Hb_000107_090 Hb_000107_090 Hb_024066_040--Hb_000107_090 Hb_002811_050 Hb_002811_050 Hb_024066_040--Hb_002811_050 Hb_000787_210 Hb_000787_210 Hb_024066_040--Hb_000787_210 Hb_024066_040--Hb_004117_370 Hb_004954_020--Hb_114271_010 Hb_001148_060 Hb_001148_060 Hb_004954_020--Hb_001148_060 Hb_014361_030 Hb_014361_030 Hb_004954_020--Hb_014361_030 Hb_002542_060 Hb_002542_060 Hb_004954_020--Hb_002542_060 Hb_011994_070 Hb_011994_070 Hb_004954_020--Hb_011994_070 Hb_000130_140 Hb_000130_140 Hb_000392_210--Hb_000130_140 Hb_000152_530 Hb_000152_530 Hb_000392_210--Hb_000152_530 Hb_010222_060 Hb_010222_060 Hb_000392_210--Hb_010222_060 Hb_003097_220 Hb_003097_220 Hb_000392_210--Hb_003097_220 Hb_031862_120 Hb_031862_120 Hb_000392_210--Hb_031862_120 Hb_002713_060 Hb_002713_060 Hb_000392_210--Hb_002713_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.399874 0.352694 0.552622 0.675611 0.0217287 0.0259424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0168177 1.10806

CAGE analysis