Hb_004116_050

Information

Type -
Description -
Location Contig4116: 86007-91820
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005060mg
description hypothetical protein
nr
ID XP_012087583.1
description PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
swissprot
ID Q42569
description Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1
trembl
ID A0A067LJG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01280 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 90a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40714: 86136-91774
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004116_050 0.0 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
2 Hb_001405_040 0.0751568136 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
3 Hb_067558_010 0.0787815505 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
4 Hb_000416_090 0.0863725846 - - Aquaporin NIP1.1, putative [Ricinus communis]
5 Hb_001244_070 0.093271371 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
6 Hb_004855_080 0.0936154491 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
7 Hb_005181_190 0.0941882425 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
8 Hb_000008_150 0.1016022165 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
9 Hb_002822_010 0.1110605237 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
10 Hb_002890_200 0.11110776 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
11 Hb_039435_010 0.1137457509 - - hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
12 Hb_001488_420 0.1175029041 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
13 Hb_000621_030 0.1188420241 - - PREDICTED: uncharacterized protein LOC105638736 isoform X1 [Jatropha curcas]
14 Hb_162174_010 0.1191840059 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
15 Hb_131876_010 0.1193407232 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
16 Hb_000181_220 0.1200104837 - - PREDICTED: MATE efflux family protein LAL5-like isoform X2 [Jatropha curcas]
17 Hb_020805_070 0.1200877616 - - PREDICTED: MLO protein homolog 1-like [Jatropha curcas]
18 Hb_000041_210 0.1208607018 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
19 Hb_000703_120 0.1213609069 - - PREDICTED: uncharacterized protein LOC105635706 isoform X1 [Jatropha curcas]
20 Hb_009788_020 0.1214320948 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Jatropha curcas]

Gene co-expression network

sample Hb_004116_050 Hb_004116_050 Hb_001405_040 Hb_001405_040 Hb_004116_050--Hb_001405_040 Hb_067558_010 Hb_067558_010 Hb_004116_050--Hb_067558_010 Hb_000416_090 Hb_000416_090 Hb_004116_050--Hb_000416_090 Hb_001244_070 Hb_001244_070 Hb_004116_050--Hb_001244_070 Hb_004855_080 Hb_004855_080 Hb_004116_050--Hb_004855_080 Hb_005181_190 Hb_005181_190 Hb_004116_050--Hb_005181_190 Hb_020805_070 Hb_020805_070 Hb_001405_040--Hb_020805_070 Hb_001405_040--Hb_004855_080 Hb_000008_150 Hb_000008_150 Hb_001405_040--Hb_000008_150 Hb_003506_010 Hb_003506_010 Hb_001405_040--Hb_003506_010 Hb_005892_040 Hb_005892_040 Hb_001405_040--Hb_005892_040 Hb_000041_210 Hb_000041_210 Hb_067558_010--Hb_000041_210 Hb_067558_010--Hb_005181_190 Hb_000239_050 Hb_000239_050 Hb_067558_010--Hb_000239_050 Hb_000947_010 Hb_000947_010 Hb_067558_010--Hb_000947_010 Hb_001409_080 Hb_001409_080 Hb_067558_010--Hb_001409_080 Hb_000416_090--Hb_001405_040 Hb_029639_030 Hb_029639_030 Hb_000416_090--Hb_029639_030 Hb_000181_220 Hb_000181_220 Hb_000416_090--Hb_000181_220 Hb_019570_010 Hb_019570_010 Hb_000416_090--Hb_019570_010 Hb_000318_010 Hb_000318_010 Hb_000416_090--Hb_000318_010 Hb_000152_120 Hb_000152_120 Hb_001244_070--Hb_000152_120 Hb_000880_040 Hb_000880_040 Hb_001244_070--Hb_000880_040 Hb_000365_440 Hb_000365_440 Hb_001244_070--Hb_000365_440 Hb_001244_070--Hb_001405_040 Hb_001244_070--Hb_020805_070 Hb_004855_080--Hb_000008_150 Hb_001488_420 Hb_001488_420 Hb_004855_080--Hb_001488_420 Hb_000759_040 Hb_000759_040 Hb_004855_080--Hb_000759_040 Hb_004855_080--Hb_003506_010 Hb_004602_010 Hb_004602_010 Hb_004855_080--Hb_004602_010 Hb_005181_190--Hb_000041_210 Hb_005181_190--Hb_000947_010 Hb_005181_190--Hb_000239_050 Hb_023732_080 Hb_023732_080 Hb_005181_190--Hb_023732_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0125373 2.55579 31.054 22.7459 0.0290499 0.0566571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160833 0.090391 0.0342669 13.1568 35.1707

CAGE analysis