Hb_004122_060

Information

Type -
Description -
Location Contig4122: 58890-60233
Sequence    

Annotation

kegg
ID rcu:RCOM_1589630
description Anthranilate N-benzoyltransferase protein, putative
nr
ID XP_012068314.1
description PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
swissprot
ID Q9SND9
description Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=3 SV=1
trembl
ID A0A067L3E7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16110 PE=4 SV=1
Gene Ontology
ID GO:0003723
description uncharacterized acetyltransferase at3g50280-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40812: 58655-60337
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004122_060 0.0 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
2 Hb_059000_010 0.0616137699 - - hypothetical protein JCGZ_17736 [Jatropha curcas]
3 Hb_009554_030 0.0710176784 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
4 Hb_001544_070 0.0752034075 - - PREDICTED: multicopper oxidase LPR1 [Jatropha curcas]
5 Hb_000946_050 0.0893812162 - - cytochrome P450, putative [Ricinus communis]
6 Hb_001141_160 0.0905458214 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
7 Hb_000092_030 0.0919966953 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
8 Hb_000096_210 0.0928402587 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
9 Hb_000840_050 0.0959251552 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
10 Hb_010880_010 0.0971173397 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
11 Hb_000398_140 0.1014113371 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
12 Hb_015306_010 0.1080307254 - - PREDICTED: uncharacterized protein LOC105636357 [Jatropha curcas]
13 Hb_138606_020 0.1131526938 - - Nitrate transporter2.5 [Theobroma cacao]
14 Hb_006788_100 0.1146888022 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
15 Hb_000085_220 0.1171904133 - - conserved hypothetical protein [Ricinus communis]
16 Hb_030982_050 0.117278852 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
17 Hb_012743_020 0.1187630594 - - serine/threonine protein phosphatase, putative [Ricinus communis]
18 Hb_000203_080 0.119280819 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
19 Hb_001174_030 0.1201836739 - - unnamed protein product [Vitis vinifera]
20 Hb_000258_210 0.1214562123 - - prenyl-dependent CAAX protease, putative [Ricinus communis]

Gene co-expression network

sample Hb_004122_060 Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_004122_060--Hb_059000_010 Hb_009554_030 Hb_009554_030 Hb_004122_060--Hb_009554_030 Hb_001544_070 Hb_001544_070 Hb_004122_060--Hb_001544_070 Hb_000946_050 Hb_000946_050 Hb_004122_060--Hb_000946_050 Hb_001141_160 Hb_001141_160 Hb_004122_060--Hb_001141_160 Hb_000092_030 Hb_000092_030 Hb_004122_060--Hb_000092_030 Hb_059000_010--Hb_001141_160 Hb_059000_010--Hb_009554_030 Hb_059000_010--Hb_000946_050 Hb_059000_010--Hb_001544_070 Hb_014250_010 Hb_014250_010 Hb_059000_010--Hb_014250_010 Hb_000096_210 Hb_000096_210 Hb_009554_030--Hb_000096_210 Hb_000866_190 Hb_000866_190 Hb_009554_030--Hb_000866_190 Hb_009554_030--Hb_014250_010 Hb_015306_010 Hb_015306_010 Hb_009554_030--Hb_015306_010 Hb_174101_010 Hb_174101_010 Hb_001544_070--Hb_174101_010 Hb_001174_030 Hb_001174_030 Hb_001544_070--Hb_001174_030 Hb_000472_020 Hb_000472_020 Hb_001544_070--Hb_000472_020 Hb_001544_070--Hb_000092_030 Hb_001706_020 Hb_001706_020 Hb_001544_070--Hb_001706_020 Hb_000946_050--Hb_000092_030 Hb_000946_050--Hb_000096_210 Hb_002450_180 Hb_002450_180 Hb_000946_050--Hb_002450_180 Hb_000946_050--Hb_001141_160 Hb_000398_140 Hb_000398_140 Hb_001141_160--Hb_000398_140 Hb_030982_050 Hb_030982_050 Hb_001141_160--Hb_030982_050 Hb_001141_160--Hb_001544_070 Hb_000085_220 Hb_000085_220 Hb_000092_030--Hb_000085_220 Hb_004166_020 Hb_004166_020 Hb_000092_030--Hb_004166_020 Hb_006269_010 Hb_006269_010 Hb_000092_030--Hb_006269_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.4636 12.3899 15.305 0 0.01591
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 16.8822 12.9561

CAGE analysis