Hb_004125_040

Information

Type -
Description -
Location Contig4125: 26254-27983
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004125_040 0.0 - - -
2 Hb_003050_250 0.0696276108 - - PREDICTED: uncharacterized protein At2g34460, chloroplastic [Jatropha curcas]
3 Hb_003050_280 0.0721204549 transcription factor TF Family: HMG DNA-binding protein MNB1B, putative [Ricinus communis]
4 Hb_001491_010 0.0757475667 - - PREDICTED: uncharacterized protein LOC105649805 [Jatropha curcas]
5 Hb_021576_030 0.0816970797 - - PREDICTED: uncharacterized protein LOC105637542 [Jatropha curcas]
6 Hb_019113_020 0.0983755328 - - hypothetical protein JCGZ_13398 [Jatropha curcas]
7 Hb_007576_170 0.1002123381 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000962_040 0.1005134964 - - heat shock protein binding protein, putative [Ricinus communis]
9 Hb_001728_060 0.1013901185 - - PREDICTED: uncharacterized protein LOC105632289 [Jatropha curcas]
10 Hb_001240_010 0.1014254493 - - PREDICTED: uncharacterized protein LOC105634101 [Jatropha curcas]
11 Hb_002872_050 0.1054872567 - - PREDICTED: thioredoxin-like 3-2, chloroplastic [Jatropha curcas]
12 Hb_000431_070 0.1072389024 - - Mitochondrial import receptor subunit TOM20, putative [Ricinus communis]
13 Hb_000318_160 0.1081558873 - - PREDICTED: uncharacterized protein LOC105634239 [Jatropha curcas]
14 Hb_004324_270 0.1083304973 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
15 Hb_003349_080 0.1122197117 - - PREDICTED: uncharacterized protein LOC105628287 [Jatropha curcas]
16 Hb_011689_120 0.1123446945 - - PREDICTED: uncharacterized protein At4g15545 [Jatropha curcas]
17 Hb_000403_070 0.1143694958 - - PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_033153_060 0.1146268756 - - Transcription elongation factor, putative [Ricinus communis]
19 Hb_161175_010 0.1166266254 - - PREDICTED: vesicle-associated protein 1-1 [Jatropha curcas]
20 Hb_002613_020 0.1169231085 - - ADP-ribose pyrophosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_004125_040 Hb_004125_040 Hb_003050_250 Hb_003050_250 Hb_004125_040--Hb_003050_250 Hb_003050_280 Hb_003050_280 Hb_004125_040--Hb_003050_280 Hb_001491_010 Hb_001491_010 Hb_004125_040--Hb_001491_010 Hb_021576_030 Hb_021576_030 Hb_004125_040--Hb_021576_030 Hb_019113_020 Hb_019113_020 Hb_004125_040--Hb_019113_020 Hb_007576_170 Hb_007576_170 Hb_004125_040--Hb_007576_170 Hb_003050_250--Hb_019113_020 Hb_001575_060 Hb_001575_060 Hb_003050_250--Hb_001575_060 Hb_001240_010 Hb_001240_010 Hb_003050_250--Hb_001240_010 Hb_001728_060 Hb_001728_060 Hb_003050_250--Hb_001728_060 Hb_000403_070 Hb_000403_070 Hb_003050_250--Hb_000403_070 Hb_000318_160 Hb_000318_160 Hb_003050_280--Hb_000318_160 Hb_003349_080 Hb_003349_080 Hb_003050_280--Hb_003349_080 Hb_000224_140 Hb_000224_140 Hb_003050_280--Hb_000224_140 Hb_002872_050 Hb_002872_050 Hb_003050_280--Hb_002872_050 Hb_003050_280--Hb_007576_170 Hb_138585_050 Hb_138585_050 Hb_001491_010--Hb_138585_050 Hb_001491_010--Hb_021576_030 Hb_000210_220 Hb_000210_220 Hb_001491_010--Hb_000210_220 Hb_001439_060 Hb_001439_060 Hb_001491_010--Hb_001439_060 Hb_008554_070 Hb_008554_070 Hb_001491_010--Hb_008554_070 Hb_087749_010 Hb_087749_010 Hb_021576_030--Hb_087749_010 Hb_005847_060 Hb_005847_060 Hb_021576_030--Hb_005847_060 Hb_002613_020 Hb_002613_020 Hb_021576_030--Hb_002613_020 Hb_004871_040 Hb_004871_040 Hb_021576_030--Hb_004871_040 Hb_161175_010 Hb_161175_010 Hb_019113_020--Hb_161175_010 Hb_002503_020 Hb_002503_020 Hb_019113_020--Hb_002503_020 Hb_000125_210 Hb_000125_210 Hb_019113_020--Hb_000125_210 Hb_019113_020--Hb_000318_160 Hb_004459_040 Hb_004459_040 Hb_007576_170--Hb_004459_040 Hb_000431_070 Hb_000431_070 Hb_007576_170--Hb_000431_070 Hb_002798_020 Hb_002798_020 Hb_007576_170--Hb_002798_020 Hb_033153_060 Hb_033153_060 Hb_007576_170--Hb_033153_060 Hb_006541_010 Hb_006541_010 Hb_007576_170--Hb_006541_010 Hb_017225_020 Hb_017225_020 Hb_007576_170--Hb_017225_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.63561 0.765771 3.00784 2.37222 2.06568 2.96636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.81308 8.13985 4.77177 1.94522 5.91761

CAGE analysis