Hb_004129_050

Information

Type -
Description -
Location Contig4129: 44876-51085
Sequence    

Annotation

kegg
ID rcu:RCOM_0696050
description Enoyl-CoA hydratase, mitochondrial precursor, putative (EC:4.2.1.17)
nr
ID XP_012088185.1
description PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
swissprot
ID Q9SHJ8
description 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana GN=At1g06550 PE=1 SV=2
trembl
ID A0A067JJW0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26646 PE=4 SV=1
Gene Ontology
ID GO:0004300
description 3-hydroxyisobutyryl- hydrolase-like protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40887: 45360-51052 , PASA_asmbl_40888: 47535-47716
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004129_050 0.0 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
2 Hb_000244_280 0.1337215655 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X1 [Jatropha curcas]
3 Hb_000041_060 0.1376484565 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_009732_020 0.1378145885 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
5 Hb_006717_070 0.1393854619 transcription factor TF Family: MYB-related PREDICTED: transcription factor CPC-like [Jatropha curcas]
6 Hb_003626_050 0.1413917135 - - malic enzyme, putative [Ricinus communis]
7 Hb_012545_090 0.1419239253 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
8 Hb_003813_120 0.1426297777 - - zinc finger protein, putative [Ricinus communis]
9 Hb_001500_070 0.1436326645 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000347_110 0.1459548222 - - BnaA05g25330D [Brassica napus]
11 Hb_002213_090 0.1483132036 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
12 Hb_000227_040 0.1542012375 - - Stem-specific protein TSJT1, putative [Ricinus communis]
13 Hb_001123_220 0.1549411817 - - -
14 Hb_033772_070 0.1558414234 - - PREDICTED: uncharacterized protein LOC105633681 [Jatropha curcas]
15 Hb_000173_260 0.1707880584 - - hypothetical protein L484_010046 [Morus notabilis]
16 Hb_000702_060 0.171997807 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007185_040 0.1727205685 - - PREDICTED: pyrroline-5-carboxylate reductase [Jatropha curcas]
18 Hb_127886_010 0.173026275 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
19 Hb_001780_150 0.1750717555 - - ceramidase, putative [Ricinus communis]
20 Hb_005180_010 0.1763849636 - - cyclophilin [Hevea brasiliensis]

Gene co-expression network

sample Hb_004129_050 Hb_004129_050 Hb_000244_280 Hb_000244_280 Hb_004129_050--Hb_000244_280 Hb_000041_060 Hb_000041_060 Hb_004129_050--Hb_000041_060 Hb_009732_020 Hb_009732_020 Hb_004129_050--Hb_009732_020 Hb_006717_070 Hb_006717_070 Hb_004129_050--Hb_006717_070 Hb_003626_050 Hb_003626_050 Hb_004129_050--Hb_003626_050 Hb_012545_090 Hb_012545_090 Hb_004129_050--Hb_012545_090 Hb_002235_190 Hb_002235_190 Hb_000244_280--Hb_002235_190 Hb_000702_060 Hb_000702_060 Hb_000244_280--Hb_000702_060 Hb_002301_250 Hb_002301_250 Hb_000244_280--Hb_002301_250 Hb_000244_280--Hb_006717_070 Hb_003607_060 Hb_003607_060 Hb_000244_280--Hb_003607_060 Hb_000808_170 Hb_000808_170 Hb_000041_060--Hb_000808_170 Hb_001369_230 Hb_001369_230 Hb_000041_060--Hb_001369_230 Hb_001500_070 Hb_001500_070 Hb_000041_060--Hb_001500_070 Hb_000041_060--Hb_003626_050 Hb_000347_110 Hb_000347_110 Hb_000041_060--Hb_000347_110 Hb_000395_220 Hb_000395_220 Hb_009732_020--Hb_000395_220 Hb_000227_040 Hb_000227_040 Hb_009732_020--Hb_000227_040 Hb_003906_170 Hb_003906_170 Hb_009732_020--Hb_003906_170 Hb_009732_020--Hb_006717_070 Hb_005333_050 Hb_005333_050 Hb_009732_020--Hb_005333_050 Hb_003849_240 Hb_003849_240 Hb_009732_020--Hb_003849_240 Hb_127886_010 Hb_127886_010 Hb_006717_070--Hb_127886_010 Hb_003626_040 Hb_003626_040 Hb_006717_070--Hb_003626_040 Hb_006717_070--Hb_000395_220 Hb_000362_110 Hb_000362_110 Hb_006717_070--Hb_000362_110 Hb_003813_120 Hb_003813_120 Hb_006717_070--Hb_003813_120 Hb_002213_090 Hb_002213_090 Hb_003626_050--Hb_002213_090 Hb_000157_070 Hb_000157_070 Hb_003626_050--Hb_000157_070 Hb_107298_010 Hb_107298_010 Hb_003626_050--Hb_107298_010 Hb_000505_100 Hb_000505_100 Hb_003626_050--Hb_000505_100 Hb_003626_050--Hb_001500_070 Hb_006829_100 Hb_006829_100 Hb_003626_050--Hb_006829_100 Hb_012545_090--Hb_000227_040 Hb_008226_070 Hb_008226_070 Hb_012545_090--Hb_008226_070 Hb_012760_040 Hb_012760_040 Hb_012545_090--Hb_012760_040 Hb_012545_090--Hb_000702_060 Hb_012545_090--Hb_009732_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.1515 37.8653 59.8561 52.388 21.0088 32.7836
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.3335 12.5028 12.401 209.067 27.1337

CAGE analysis