Hb_004143_030

Information

Type -
Description -
Location Contig4143: 20030-20822
Sequence    

Annotation

kegg
ID rcu:RCOM_1039570
description hypothetical protein
nr
ID XP_012068018.1
description PREDICTED: chromosome-associated kinesin KIF4B [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15889 PE=4 SV=1
Gene Ontology
ID GO:0008152
description chromosome-associated kinesin-related family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004143_030 0.0 - - PREDICTED: chromosome-associated kinesin KIF4B [Jatropha curcas]
2 Hb_000049_220 0.1839658794 - - ammonium transporter, putative [Ricinus communis]
3 Hb_027380_240 0.1915121648 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic [Jatropha curcas]
4 Hb_007504_030 0.1966015702 - - Rpl14, partial (chloroplast) [Schistostemon retusum]
5 Hb_007317_170 0.264228355 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
6 Hb_000603_270 0.2649917536 - - PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas]
7 Hb_004738_060 0.2894447223 - - predicted protein [Arabidopsis lyrata subsp. lyrata]
8 Hb_020469_010 0.3081304088 - - -
9 Hb_000088_150 0.3131566211 - - hypothetical protein POPTR_0013s11250g [Populus trichocarpa]
10 Hb_003055_030 0.3135414974 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
11 Hb_001257_150 0.3145844194 - - -
12 Hb_004048_030 0.3179380056 - - hypothetical protein B456_009G371200, partial [Gossypium raimondii]
13 Hb_015026_030 0.3244260987 - - hypothetical protein POPTR_0011s04350g [Populus trichocarpa]
14 Hb_071126_010 0.326356884 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
15 Hb_007504_040 0.3284973472 - - hypothetical chloroplast RF2 [Fragaria iinumae]
16 Hb_000130_330 0.3315526053 transcription factor TF Family: TCP PREDICTED: transcription factor TCP3-like [Jatropha curcas]
17 Hb_069512_010 0.3329085153 - - -
18 Hb_001155_020 0.3334929773 - - Leucine-rich repeat protein kinase family protein isoform 2 [Theobroma cacao]
19 Hb_001352_080 0.3339636085 - - PREDICTED: uncharacterized protein At5g02240 [Jatropha curcas]
20 Hb_017043_030 0.3372817726 - - hypothetical protein CISIN_1g011604mg [Citrus sinensis]

Gene co-expression network

sample Hb_004143_030 Hb_004143_030 Hb_000049_220 Hb_000049_220 Hb_004143_030--Hb_000049_220 Hb_027380_240 Hb_027380_240 Hb_004143_030--Hb_027380_240 Hb_007504_030 Hb_007504_030 Hb_004143_030--Hb_007504_030 Hb_007317_170 Hb_007317_170 Hb_004143_030--Hb_007317_170 Hb_000603_270 Hb_000603_270 Hb_004143_030--Hb_000603_270 Hb_004738_060 Hb_004738_060 Hb_004143_030--Hb_004738_060 Hb_000049_220--Hb_007504_030 Hb_134546_010 Hb_134546_010 Hb_000049_220--Hb_134546_010 Hb_001257_150 Hb_001257_150 Hb_000049_220--Hb_001257_150 Hb_000049_220--Hb_027380_240 Hb_000189_400 Hb_000189_400 Hb_000049_220--Hb_000189_400 Hb_162094_010 Hb_162094_010 Hb_027380_240--Hb_162094_010 Hb_001338_160 Hb_001338_160 Hb_027380_240--Hb_001338_160 Hb_001155_020 Hb_001155_020 Hb_027380_240--Hb_001155_020 Hb_008206_070 Hb_008206_070 Hb_027380_240--Hb_008206_070 Hb_007504_030--Hb_007317_170 Hb_007504_030--Hb_000603_270 Hb_003055_030 Hb_003055_030 Hb_007504_030--Hb_003055_030 Hb_071126_010 Hb_071126_010 Hb_007504_030--Hb_071126_010 Hb_004208_090 Hb_004208_090 Hb_007504_030--Hb_004208_090 Hb_007317_170--Hb_003055_030 Hb_000768_120 Hb_000768_120 Hb_007317_170--Hb_000768_120 Hb_004117_150 Hb_004117_150 Hb_007317_170--Hb_004117_150 Hb_007317_170--Hb_004208_090 Hb_000130_330 Hb_000130_330 Hb_007317_170--Hb_000130_330 Hb_002400_010 Hb_002400_010 Hb_000603_270--Hb_002400_010 Hb_002498_170 Hb_002498_170 Hb_000603_270--Hb_002498_170 Hb_000340_410 Hb_000340_410 Hb_000603_270--Hb_000340_410 Hb_001352_080 Hb_001352_080 Hb_000603_270--Hb_001352_080 Hb_000322_040 Hb_000322_040 Hb_000603_270--Hb_000322_040 Hb_008408_050 Hb_008408_050 Hb_004738_060--Hb_008408_050 Hb_000059_120 Hb_000059_120 Hb_004738_060--Hb_000059_120 Hb_001579_210 Hb_001579_210 Hb_004738_060--Hb_001579_210 Hb_021409_130 Hb_021409_130 Hb_004738_060--Hb_021409_130 Hb_000842_060 Hb_000842_060 Hb_004738_060--Hb_000842_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.109108 0 0.344432 0 0.0451189 0.128655
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.336106

CAGE analysis