Hb_004143_070

Information

Type -
Description -
Location Contig4143: 52736-59515
Sequence    

Annotation

kegg
ID rcu:RCOM_1039620
description cytochrome P450, putative (EC:1.6.2.4)
nr
ID XP_002514049.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P37116
description NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata PE=1 SV=1
trembl
ID B9RJY0
description NADPH--cytochrome P450 reductase OS=Ricinus communis GN=RCOM_1039620 PE=3 SV=1
Gene Ontology
ID GO:0005789
description nadph--cytochrome p450 reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41030: 52750-59398
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004143_070 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_046615_020 0.0825151484 - - PREDICTED: uncharacterized protein LOC105649409 [Jatropha curcas]
3 Hb_002493_090 0.0839860497 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X2 [Jatropha curcas]
4 Hb_000181_310 0.0892268866 - - hypothetical protein JCGZ_20998 [Jatropha curcas]
5 Hb_002159_040 0.0892847839 - - hypothetical protein PRUPE_ppa001563mg [Prunus persica]
6 Hb_000244_240 0.0905173059 - - ATP binding protein, putative [Ricinus communis]
7 Hb_033594_020 0.0921686306 - - PREDICTED: ruvB-like 2 [Jatropha curcas]
8 Hb_000335_010 0.0957305693 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_002043_170 0.0966296198 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
10 Hb_001975_020 0.0980489162 - - PREDICTED: uncharacterized protein LOC105637186 [Jatropha curcas]
11 Hb_002675_040 0.0992302986 - - ran-binding protein, putative [Ricinus communis]
12 Hb_003018_160 0.1000209467 - - PREDICTED: uncharacterized protein LOC105628876 [Jatropha curcas]
13 Hb_006002_030 0.1003596472 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
14 Hb_000230_370 0.1014728646 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Jatropha curcas]
15 Hb_007305_010 0.1020701493 - - PREDICTED: girdin-like [Jatropha curcas]
16 Hb_001268_210 0.1023964288 - - zinc finger protein, putative [Ricinus communis]
17 Hb_017895_020 0.1025725061 - - Vacuolar protein sorting protein, putative [Ricinus communis]
18 Hb_022250_110 0.1030534041 - - PREDICTED: staphylococcal nuclease domain-containing protein 1 [Jatropha curcas]
19 Hb_001301_210 0.104390625 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Jatropha curcas]
20 Hb_008725_130 0.1050739867 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]

Gene co-expression network

sample Hb_004143_070 Hb_004143_070 Hb_046615_020 Hb_046615_020 Hb_004143_070--Hb_046615_020 Hb_002493_090 Hb_002493_090 Hb_004143_070--Hb_002493_090 Hb_000181_310 Hb_000181_310 Hb_004143_070--Hb_000181_310 Hb_002159_040 Hb_002159_040 Hb_004143_070--Hb_002159_040 Hb_000244_240 Hb_000244_240 Hb_004143_070--Hb_000244_240 Hb_033594_020 Hb_033594_020 Hb_004143_070--Hb_033594_020 Hb_001975_020 Hb_001975_020 Hb_046615_020--Hb_001975_020 Hb_002043_170 Hb_002043_170 Hb_046615_020--Hb_002043_170 Hb_000230_370 Hb_000230_370 Hb_046615_020--Hb_000230_370 Hb_031754_010 Hb_031754_010 Hb_046615_020--Hb_031754_010 Hb_004096_020 Hb_004096_020 Hb_046615_020--Hb_004096_020 Hb_000531_090 Hb_000531_090 Hb_046615_020--Hb_000531_090 Hb_003018_160 Hb_003018_160 Hb_002493_090--Hb_003018_160 Hb_002493_090--Hb_001975_020 Hb_000335_010 Hb_000335_010 Hb_002493_090--Hb_000335_010 Hb_002493_090--Hb_031754_010 Hb_000849_100 Hb_000849_100 Hb_002493_090--Hb_000849_100 Hb_007757_100 Hb_007757_100 Hb_000181_310--Hb_007757_100 Hb_003666_050 Hb_003666_050 Hb_000181_310--Hb_003666_050 Hb_003580_040 Hb_003580_040 Hb_000181_310--Hb_003580_040 Hb_000540_140 Hb_000540_140 Hb_000181_310--Hb_000540_140 Hb_009913_050 Hb_009913_050 Hb_000181_310--Hb_009913_050 Hb_002159_040--Hb_000244_240 Hb_011497_010 Hb_011497_010 Hb_002159_040--Hb_011497_010 Hb_000441_160 Hb_000441_160 Hb_002159_040--Hb_000441_160 Hb_002159_030 Hb_002159_030 Hb_002159_040--Hb_002159_030 Hb_000329_490 Hb_000329_490 Hb_002159_040--Hb_000329_490 Hb_001301_210 Hb_001301_210 Hb_000244_240--Hb_001301_210 Hb_007348_030 Hb_007348_030 Hb_000244_240--Hb_007348_030 Hb_000244_240--Hb_046615_020 Hb_000120_510 Hb_000120_510 Hb_000244_240--Hb_000120_510 Hb_000244_240--Hb_000230_370 Hb_002675_040 Hb_002675_040 Hb_033594_020--Hb_002675_040 Hb_033594_020--Hb_046615_020 Hb_000343_210 Hb_000343_210 Hb_033594_020--Hb_000343_210 Hb_007885_070 Hb_007885_070 Hb_033594_020--Hb_007885_070 Hb_003656_160 Hb_003656_160 Hb_033594_020--Hb_003656_160 Hb_017895_020 Hb_017895_020 Hb_033594_020--Hb_017895_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
168.825 50.3958 36.3049 42.7304 157.386 153.324
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
57.15 15.6484 40.4873 37.3993 41.5791

CAGE analysis