Hb_004143_080

Information

Type -
Description -
Location Contig4143: 61667-65756
Sequence    

Annotation

kegg
ID rcu:RCOM_1039630
description Anthranilate N-benzoyltransferase protein, putative
nr
ID XP_012068024.1
description PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
swissprot
ID Q39048
description Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER2 PE=1 SV=1
trembl
ID A0A067L2L6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15895 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein eceriferum 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41032: 61431-65751 , PASA_asmbl_41035: 62587-63900
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004143_080 0.0 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
2 Hb_000815_120 0.0403622412 - - calcium ion binding protein, putative [Ricinus communis]
3 Hb_004818_010 0.0466322149 - - hypothetical protein JCGZ_13628 [Jatropha curcas]
4 Hb_003093_050 0.0489237467 - - PREDICTED: uncharacterized protein LOC105641023 isoform X2 [Jatropha curcas]
5 Hb_002301_070 0.0493580628 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_000704_020 0.0509129451 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001951_050 0.0514962497 - - chlorophyll A/B binding protein, putative [Ricinus communis]
8 Hb_001097_110 0.0542003477 - - gibberellin 20-oxidase, putative [Ricinus communis]
9 Hb_000928_260 0.0604699934 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
10 Hb_000629_110 0.0604933745 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
11 Hb_000140_040 0.0609211248 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
12 Hb_003787_030 0.0630414579 - - conserved hypothetical protein [Ricinus communis]
13 Hb_081344_010 0.0647372925 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
14 Hb_000152_300 0.064839646 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
15 Hb_000433_040 0.0655204561 - - -
16 Hb_029584_020 0.0666796572 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010666_020 0.0685421866 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
18 Hb_000883_080 0.0699195276 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_158597_010 0.0710247233 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial [Jatropha curcas]
20 Hb_003805_110 0.0711215057 - - PREDICTED: laccase-11-like [Jatropha curcas]

Gene co-expression network

sample Hb_004143_080 Hb_004143_080 Hb_000815_120 Hb_000815_120 Hb_004143_080--Hb_000815_120 Hb_004818_010 Hb_004818_010 Hb_004143_080--Hb_004818_010 Hb_003093_050 Hb_003093_050 Hb_004143_080--Hb_003093_050 Hb_002301_070 Hb_002301_070 Hb_004143_080--Hb_002301_070 Hb_000704_020 Hb_000704_020 Hb_004143_080--Hb_000704_020 Hb_001951_050 Hb_001951_050 Hb_004143_080--Hb_001951_050 Hb_000815_120--Hb_004818_010 Hb_000815_120--Hb_000704_020 Hb_000815_120--Hb_001951_050 Hb_000815_120--Hb_002301_070 Hb_000815_120--Hb_003093_050 Hb_004818_010--Hb_003093_050 Hb_004818_010--Hb_000704_020 Hb_029584_020 Hb_029584_020 Hb_004818_010--Hb_029584_020 Hb_000530_060 Hb_000530_060 Hb_004818_010--Hb_000530_060 Hb_003093_050--Hb_029584_020 Hb_000629_110 Hb_000629_110 Hb_003093_050--Hb_000629_110 Hb_003093_050--Hb_000530_060 Hb_003093_050--Hb_000704_020 Hb_000928_260 Hb_000928_260 Hb_002301_070--Hb_000928_260 Hb_003787_030 Hb_003787_030 Hb_002301_070--Hb_003787_030 Hb_010697_020 Hb_010697_020 Hb_002301_070--Hb_010697_020 Hb_006573_240 Hb_006573_240 Hb_002301_070--Hb_006573_240 Hb_158597_010 Hb_158597_010 Hb_000704_020--Hb_158597_010 Hb_000704_020--Hb_000629_110 Hb_001140_110 Hb_001140_110 Hb_001951_050--Hb_001140_110 Hb_001080_290 Hb_001080_290 Hb_001951_050--Hb_001080_290 Hb_001097_110 Hb_001097_110 Hb_001951_050--Hb_001097_110 Hb_042123_010 Hb_042123_010 Hb_001951_050--Hb_042123_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.54866 26.5642 31.4813 0 0.0166715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0369255 0.0290478 0 0 151.889

CAGE analysis