Hb_004146_030

Information

Type -
Description -
Location Contig4146: 51927-53330
Sequence    

Annotation

kegg
ID rcu:RCOM_0671050
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002520576.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q40288
description Anthocyanidin 3-O-glucosyltransferase 6 (Fragment) OS=Manihot esculenta GN=GT6 PE=2 SV=1
trembl
ID B9S3K7
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0671050 PE=3 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41081: 53378-53516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004146_030 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_007426_070 0.0555775833 - - PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase [Jatropha curcas]
3 Hb_000026_060 0.0621521593 - - beta-1,3-glucanase [Manihot esculenta]
4 Hb_000017_210 0.0742915657 - - PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
5 Hb_000483_440 0.0774857721 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000858_050 0.088925611 - - kinase, putative [Ricinus communis]
7 Hb_001579_050 0.0894268063 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_000694_080 0.0926692814 - - phosphoribulose kinase, putative [Ricinus communis]
9 Hb_003171_040 0.095381091 - - multidrug resistance pump, putative [Ricinus communis]
10 Hb_080791_010 0.097081058 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
11 Hb_004242_200 0.0995722214 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
12 Hb_000482_030 0.0997836551 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like isoform X1 [Populus euphratica]
13 Hb_000081_110 0.1032995305 - - nitrate transporter, putative [Ricinus communis]
14 Hb_009093_020 0.1091750875 - - PREDICTED: uncharacterized protein LOC105642100 [Jatropha curcas]
15 Hb_000841_040 0.1094214252 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
16 Hb_001517_060 0.1115113242 - - phosphoribulose kinase, putative [Ricinus communis]
17 Hb_168319_040 0.1131523532 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
18 Hb_015807_020 0.1161149893 - - gibberellin 20-oxidase, putative [Ricinus communis]
19 Hb_001300_240 0.1168850623 - - shikimate dehydrogenase, putative [Ricinus communis]
20 Hb_001289_050 0.1171844016 - - hypothetical protein Poptr_cp075 [Populus trichocarpa]

Gene co-expression network

sample Hb_004146_030 Hb_004146_030 Hb_007426_070 Hb_007426_070 Hb_004146_030--Hb_007426_070 Hb_000026_060 Hb_000026_060 Hb_004146_030--Hb_000026_060 Hb_000017_210 Hb_000017_210 Hb_004146_030--Hb_000017_210 Hb_000483_440 Hb_000483_440 Hb_004146_030--Hb_000483_440 Hb_000858_050 Hb_000858_050 Hb_004146_030--Hb_000858_050 Hb_001579_050 Hb_001579_050 Hb_004146_030--Hb_001579_050 Hb_007426_070--Hb_000017_210 Hb_007426_070--Hb_000483_440 Hb_000694_080 Hb_000694_080 Hb_007426_070--Hb_000694_080 Hb_000482_030 Hb_000482_030 Hb_007426_070--Hb_000482_030 Hb_000081_110 Hb_000081_110 Hb_007426_070--Hb_000081_110 Hb_080791_010 Hb_080791_010 Hb_000026_060--Hb_080791_010 Hb_000026_060--Hb_000858_050 Hb_003171_040 Hb_003171_040 Hb_000026_060--Hb_003171_040 Hb_015817_010 Hb_015817_010 Hb_000026_060--Hb_015817_010 Hb_000026_060--Hb_007426_070 Hb_000017_210--Hb_000483_440 Hb_000017_210--Hb_000694_080 Hb_000017_210--Hb_000482_030 Hb_005305_070 Hb_005305_070 Hb_000017_210--Hb_005305_070 Hb_000483_440--Hb_000694_080 Hb_000483_440--Hb_000081_110 Hb_000483_440--Hb_005305_070 Hb_015807_020 Hb_015807_020 Hb_000858_050--Hb_015807_020 Hb_000282_100 Hb_000282_100 Hb_000858_050--Hb_000282_100 Hb_005029_030 Hb_005029_030 Hb_000858_050--Hb_005029_030 Hb_001289_050 Hb_001289_050 Hb_000858_050--Hb_001289_050 Hb_001517_060 Hb_001517_060 Hb_001579_050--Hb_001517_060 Hb_001579_050--Hb_015807_020 Hb_001579_050--Hb_001289_050 Hb_000139_030 Hb_000139_030 Hb_001579_050--Hb_000139_030 Hb_001579_050--Hb_000081_110 Hb_002534_090 Hb_002534_090 Hb_001579_050--Hb_002534_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.60982 12.7426 3.87567 0 0.0299934
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.067426 0 0 2.86107 41.2174

CAGE analysis