Hb_004157_060

Information

Type -
Description -
Location Contig4157: 49687-50729
Sequence    

Annotation

kegg
ID rcu:RCOM_1629790
description Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative (EC:2.4.1.207)
nr
ID XP_012074086.1
description PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Jatropha curcas]
swissprot
ID Q38857
description Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1
trembl
ID A0A067KVX8
description Xyloglucan endotransglucosylase/hydrolase OS=Jatropha curcas GN=JCGZ_08699 PE=3 SV=1
Gene Ontology
ID GO:0005618
description xyloglucan endotransglucosylase hydrolase protein 22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004157_060 0.0 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Jatropha curcas]
2 Hb_001675_260 0.0956024995 - - nitrate transporter, putative [Ricinus communis]
3 Hb_027402_110 0.0983975971 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
4 Hb_001766_140 0.098452302 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
5 Hb_000021_010 0.1097041964 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001318_180 0.1107726787 - - PREDICTED: protein NIM1-INTERACTING 1 [Jatropha curcas]
7 Hb_006187_020 0.1206574853 - - PREDICTED: WAT1-related protein At5g07050-like [Populus euphratica]
8 Hb_003529_010 0.1214084756 - - PREDICTED: disease resistance protein RPS6-like [Jatropha curcas]
9 Hb_000120_600 0.1234027758 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
10 Hb_029576_070 0.1351294629 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
11 Hb_001255_030 0.1353221927 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
12 Hb_123887_010 0.1443512328 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
13 Hb_001856_130 0.1459448911 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
14 Hb_057018_010 0.1468544911 - - hypothetical protein JCGZ_04004 [Jatropha curcas]
15 Hb_003906_150 0.1472900849 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
16 Hb_002783_210 0.1491784047 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
17 Hb_001502_010 0.1499450669 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
18 Hb_017549_010 0.1503197071 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
19 Hb_004007_190 0.1503581901 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
20 Hb_000983_110 0.1504274145 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]

Gene co-expression network

sample Hb_004157_060 Hb_004157_060 Hb_001675_260 Hb_001675_260 Hb_004157_060--Hb_001675_260 Hb_027402_110 Hb_027402_110 Hb_004157_060--Hb_027402_110 Hb_001766_140 Hb_001766_140 Hb_004157_060--Hb_001766_140 Hb_000021_010 Hb_000021_010 Hb_004157_060--Hb_000021_010 Hb_001318_180 Hb_001318_180 Hb_004157_060--Hb_001318_180 Hb_006187_020 Hb_006187_020 Hb_004157_060--Hb_006187_020 Hb_003529_010 Hb_003529_010 Hb_001675_260--Hb_003529_010 Hb_001675_260--Hb_001318_180 Hb_001675_260--Hb_027402_110 Hb_004007_190 Hb_004007_190 Hb_001675_260--Hb_004007_190 Hb_000604_050 Hb_000604_050 Hb_001675_260--Hb_000604_050 Hb_027402_110--Hb_001766_140 Hb_008200_010 Hb_008200_010 Hb_027402_110--Hb_008200_010 Hb_001502_010 Hb_001502_010 Hb_027402_110--Hb_001502_010 Hb_001255_030 Hb_001255_030 Hb_027402_110--Hb_001255_030 Hb_005695_050 Hb_005695_050 Hb_027402_110--Hb_005695_050 Hb_001766_140--Hb_006187_020 Hb_001766_140--Hb_005695_050 Hb_000429_080 Hb_000429_080 Hb_001766_140--Hb_000429_080 Hb_001766_140--Hb_008200_010 Hb_000021_010--Hb_001318_180 Hb_000021_010--Hb_004007_190 Hb_000021_010--Hb_003529_010 Hb_000021_010--Hb_001675_260 Hb_003906_150 Hb_003906_150 Hb_000021_010--Hb_003906_150 Hb_001318_180--Hb_004007_190 Hb_001318_180--Hb_003529_010 Hb_001318_180--Hb_003906_150 Hb_001318_180--Hb_027402_110 Hb_006187_020--Hb_005695_050 Hb_006187_020--Hb_000429_080 Hb_006187_020--Hb_027402_110 Hb_003442_020 Hb_003442_020 Hb_006187_020--Hb_003442_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.04594 0.427789 2.82062 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0477621 0 0.0578458 0.0966041

CAGE analysis