Hb_004162_020

Information

Type -
Description -
Location Contig4162: 3855-4532
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004162_020 0.0 - - -
2 Hb_000362_050 0.1999958366 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
3 Hb_000210_140 0.2213742361 - - PREDICTED: uncharacterized protein LOC105635827 [Jatropha curcas]
4 Hb_029977_010 0.2318588421 - - catalytic, putative [Ricinus communis]
5 Hb_002119_070 0.2433909653 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
6 Hb_001486_060 0.2439438872 - - PREDICTED: uncharacterized protein LOC105632622 [Jatropha curcas]
7 Hb_000483_130 0.2456423527 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
8 Hb_001564_090 0.2459945015 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004316_030 0.2507937719 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
10 Hb_000058_090 0.2517187391 - - -
11 Hb_003050_100 0.2517693951 - - PREDICTED: uncharacterized protein LOC105633987 [Jatropha curcas]
12 Hb_006153_130 0.2528502403 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_000563_410 0.2540300611 - - hypothetical protein JCGZ_18917 [Jatropha curcas]
14 Hb_099448_010 0.2571163627 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
15 Hb_003972_040 0.25748746 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 6 [Jatropha curcas]
16 Hb_007632_130 0.2599578828 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
17 Hb_004607_040 0.2622739477 - - ADP,ATP carrier protein, putative [Ricinus communis]
18 Hb_151706_010 0.2624741713 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
19 Hb_010175_060 0.2640113041 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001493_020 0.2671560924 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]

Gene co-expression network

sample Hb_004162_020 Hb_004162_020 Hb_000362_050 Hb_000362_050 Hb_004162_020--Hb_000362_050 Hb_000210_140 Hb_000210_140 Hb_004162_020--Hb_000210_140 Hb_029977_010 Hb_029977_010 Hb_004162_020--Hb_029977_010 Hb_002119_070 Hb_002119_070 Hb_004162_020--Hb_002119_070 Hb_001486_060 Hb_001486_060 Hb_004162_020--Hb_001486_060 Hb_000483_130 Hb_000483_130 Hb_004162_020--Hb_000483_130 Hb_000362_050--Hb_000483_130 Hb_000362_050--Hb_000210_140 Hb_006153_130 Hb_006153_130 Hb_000362_050--Hb_006153_130 Hb_000362_050--Hb_002119_070 Hb_007943_020 Hb_007943_020 Hb_000362_050--Hb_007943_020 Hb_002970_070 Hb_002970_070 Hb_000362_050--Hb_002970_070 Hb_000210_140--Hb_006153_130 Hb_001856_160 Hb_001856_160 Hb_000210_140--Hb_001856_160 Hb_003847_050 Hb_003847_050 Hb_000210_140--Hb_003847_050 Hb_003788_010 Hb_003788_010 Hb_000210_140--Hb_003788_010 Hb_000210_140--Hb_007943_020 Hb_029260_010 Hb_029260_010 Hb_000210_140--Hb_029260_010 Hb_001493_020 Hb_001493_020 Hb_029977_010--Hb_001493_020 Hb_004316_030 Hb_004316_030 Hb_029977_010--Hb_004316_030 Hb_001564_090 Hb_001564_090 Hb_029977_010--Hb_001564_090 Hb_001021_030 Hb_001021_030 Hb_029977_010--Hb_001021_030 Hb_002026_080 Hb_002026_080 Hb_029977_010--Hb_002026_080 Hb_184942_010 Hb_184942_010 Hb_029977_010--Hb_184942_010 Hb_010605_010 Hb_010605_010 Hb_002119_070--Hb_010605_010 Hb_004531_110 Hb_004531_110 Hb_002119_070--Hb_004531_110 Hb_002928_120 Hb_002928_120 Hb_002119_070--Hb_002928_120 Hb_001071_060 Hb_001071_060 Hb_002119_070--Hb_001071_060 Hb_151706_010 Hb_151706_010 Hb_002119_070--Hb_151706_010 Hb_000818_080 Hb_000818_080 Hb_001486_060--Hb_000818_080 Hb_000793_040 Hb_000793_040 Hb_001486_060--Hb_000793_040 Hb_001486_060--Hb_002026_080 Hb_001486_060--Hb_000483_130 Hb_086336_010 Hb_086336_010 Hb_001486_060--Hb_086336_010 Hb_004657_080 Hb_004657_080 Hb_001486_060--Hb_004657_080 Hb_003226_030 Hb_003226_030 Hb_000483_130--Hb_003226_030 Hb_000095_070 Hb_000095_070 Hb_000483_130--Hb_000095_070 Hb_073808_010 Hb_073808_010 Hb_000483_130--Hb_073808_010 Hb_000483_130--Hb_007943_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.480814 0.165014 1.40161 0 0.587674
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.44549 0.326837

CAGE analysis