Hb_004193_010

Information

Type -
Description -
Location Contig4193: 17075-17794
Sequence    

Annotation

kegg
ID rcu:RCOM_0149210
description hypothetical protein
nr
ID XP_012092997.1
description PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8L6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05880 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 011_G13.ab1: 17099-17852

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004193_010 0.0 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
2 Hb_143813_020 0.1561730497 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
3 Hb_006120_150 0.1680504756 - - invertase [Hevea brasiliensis]
4 Hb_069591_010 0.1861246238 - - -
5 Hb_002478_040 0.188486033 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]
6 Hb_006545_020 0.1904126942 - - multicopper oxidase, putative [Ricinus communis]
7 Hb_000979_060 0.1922101016 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
8 Hb_000120_250 0.20001336 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
9 Hb_008725_060 0.2012157839 - - Protein COBRA precursor, putative [Ricinus communis]
10 Hb_002897_100 0.2013223512 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_174829_020 0.2014403449 transcription factor TF Family: C2C2-Dof cyclic dof factor 2 [Jatropha curcas]
12 Hb_000009_220 0.2018635057 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
13 Hb_000069_240 0.2045514764 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3-like [Jatropha curcas]
14 Hb_012545_030 0.2081970408 - - Polyadenylate-binding protein RBP47C [Glycine soja]
15 Hb_004635_030 0.2089433887 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
16 Hb_006472_070 0.2091906084 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
17 Hb_000684_100 0.2096148538 - - PREDICTED: cell number regulator 8 [Jatropha curcas]
18 Hb_000197_200 0.2119691626 - - Sec14 cytosolic factor, putative [Ricinus communis]
19 Hb_002311_480 0.2126215615 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
20 Hb_000123_220 0.2142975529 transcription factor TF Family: C2H2 hypothetical protein JCGZ_18434 [Jatropha curcas]

Gene co-expression network

sample Hb_004193_010 Hb_004193_010 Hb_143813_020 Hb_143813_020 Hb_004193_010--Hb_143813_020 Hb_006120_150 Hb_006120_150 Hb_004193_010--Hb_006120_150 Hb_069591_010 Hb_069591_010 Hb_004193_010--Hb_069591_010 Hb_002478_040 Hb_002478_040 Hb_004193_010--Hb_002478_040 Hb_006545_020 Hb_006545_020 Hb_004193_010--Hb_006545_020 Hb_000979_060 Hb_000979_060 Hb_004193_010--Hb_000979_060 Hb_004155_020 Hb_004155_020 Hb_143813_020--Hb_004155_020 Hb_000684_100 Hb_000684_100 Hb_143813_020--Hb_000684_100 Hb_001863_160 Hb_001863_160 Hb_143813_020--Hb_001863_160 Hb_001369_470 Hb_001369_470 Hb_143813_020--Hb_001369_470 Hb_001214_190 Hb_001214_190 Hb_143813_020--Hb_001214_190 Hb_005903_020 Hb_005903_020 Hb_143813_020--Hb_005903_020 Hb_012545_030 Hb_012545_030 Hb_006120_150--Hb_012545_030 Hb_000123_240 Hb_000123_240 Hb_006120_150--Hb_000123_240 Hb_010891_020 Hb_010891_020 Hb_006120_150--Hb_010891_020 Hb_005701_110 Hb_005701_110 Hb_006120_150--Hb_005701_110 Hb_002042_170 Hb_002042_170 Hb_006120_150--Hb_002042_170 Hb_004208_140 Hb_004208_140 Hb_006120_150--Hb_004208_140 Hb_001140_090 Hb_001140_090 Hb_069591_010--Hb_001140_090 Hb_000137_020 Hb_000137_020 Hb_069591_010--Hb_000137_020 Hb_008725_050 Hb_008725_050 Hb_069591_010--Hb_008725_050 Hb_000156_090 Hb_000156_090 Hb_069591_010--Hb_000156_090 Hb_011618_070 Hb_011618_070 Hb_069591_010--Hb_011618_070 Hb_003018_030 Hb_003018_030 Hb_069591_010--Hb_003018_030 Hb_004635_030 Hb_004635_030 Hb_002478_040--Hb_004635_030 Hb_002478_040--Hb_000979_060 Hb_000152_760 Hb_000152_760 Hb_002478_040--Hb_000152_760 Hb_000579_190 Hb_000579_190 Hb_002478_040--Hb_000579_190 Hb_013405_150 Hb_013405_150 Hb_002478_040--Hb_013405_150 Hb_003605_050 Hb_003605_050 Hb_002478_040--Hb_003605_050 Hb_000109_130 Hb_000109_130 Hb_006545_020--Hb_000109_130 Hb_002897_100 Hb_002897_100 Hb_006545_020--Hb_002897_100 Hb_000185_230 Hb_000185_230 Hb_006545_020--Hb_000185_230 Hb_001059_090 Hb_001059_090 Hb_006545_020--Hb_001059_090 Hb_000272_110 Hb_000272_110 Hb_006545_020--Hb_000272_110 Hb_000979_060--Hb_000684_100 Hb_005194_020 Hb_005194_020 Hb_000979_060--Hb_005194_020 Hb_002311_480 Hb_002311_480 Hb_000979_060--Hb_002311_480 Hb_000009_220 Hb_000009_220 Hb_000979_060--Hb_000009_220 Hb_001322_020 Hb_001322_020 Hb_000979_060--Hb_001322_020 Hb_000979_060--Hb_000579_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0727 48.223 90.8327 26.4546 9.62257 4.7098
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.9367 15.2321 55.0766 17.5261 8.61932

CAGE analysis