Hb_004195_040

Information

Type -
Description -
Location Contig4195: 78486-79818
Sequence    

Annotation

kegg
ID cmo:103504443
description salicylate carboxymethyltransferase-like
nr
ID CAQ58077.1
description salicylic acid methyl transferase [Capsicum annuum]
swissprot
ID -
description -
trembl
ID K7MH61
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID GO:0030795
description salicylate o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_040 0.0 - - salicylic acid methyl transferase [Capsicum annuum]
2 Hb_012019_030 0.0192879634 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
3 Hb_004185_040 0.0477397727 - - polygalacturonase, putative [Ricinus communis]
4 Hb_001141_170 0.0666727908 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
5 Hb_139460_010 0.0729750971 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
6 Hb_000813_120 0.0771479368 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
7 Hb_005731_080 0.0773528311 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
8 Hb_001114_300 0.079741852 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
9 Hb_011856_010 0.0803607036 - - cytochrome P450, putative [Ricinus communis]
10 Hb_003074_070 0.0816209414 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_122574_020 0.0821065384 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
12 Hb_006478_190 0.0843702052 - - lipid binding protein, putative [Ricinus communis]
13 Hb_059162_010 0.0847255308 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_002743_030 0.0849248962 transcription factor TF Family: MYB PREDICTED: transcription factor RAX2 [Populus euphratica]
15 Hb_041769_010 0.0854694637 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
16 Hb_011824_010 0.0862268565 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
17 Hb_001080_310 0.0871473065 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
18 Hb_001173_050 0.0871757782 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
19 Hb_002311_050 0.0882633362 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
20 Hb_000160_230 0.0905206367 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]

Gene co-expression network

sample Hb_004195_040 Hb_004195_040 Hb_012019_030 Hb_012019_030 Hb_004195_040--Hb_012019_030 Hb_004185_040 Hb_004185_040 Hb_004195_040--Hb_004185_040 Hb_001141_170 Hb_001141_170 Hb_004195_040--Hb_001141_170 Hb_139460_010 Hb_139460_010 Hb_004195_040--Hb_139460_010 Hb_000813_120 Hb_000813_120 Hb_004195_040--Hb_000813_120 Hb_005731_080 Hb_005731_080 Hb_004195_040--Hb_005731_080 Hb_012019_030--Hb_001141_170 Hb_012019_030--Hb_004185_040 Hb_001114_300 Hb_001114_300 Hb_012019_030--Hb_001114_300 Hb_006478_190 Hb_006478_190 Hb_012019_030--Hb_006478_190 Hb_012019_030--Hb_005731_080 Hb_001173_050 Hb_001173_050 Hb_004185_040--Hb_001173_050 Hb_011856_010 Hb_011856_010 Hb_004185_040--Hb_011856_010 Hb_004185_040--Hb_139460_010 Hb_004185_040--Hb_000813_120 Hb_001141_170--Hb_001114_300 Hb_010712_020 Hb_010712_020 Hb_001141_170--Hb_010712_020 Hb_000859_040 Hb_000859_040 Hb_001141_170--Hb_000859_040 Hb_011824_010 Hb_011824_010 Hb_001141_170--Hb_011824_010 Hb_139460_010--Hb_011856_010 Hb_139460_010--Hb_011824_010 Hb_002615_050 Hb_002615_050 Hb_139460_010--Hb_002615_050 Hb_139460_010--Hb_001173_050 Hb_000160_230 Hb_000160_230 Hb_139460_010--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_139460_010--Hb_007810_140 Hb_183700_010 Hb_183700_010 Hb_000813_120--Hb_183700_010 Hb_039342_030 Hb_039342_030 Hb_000813_120--Hb_039342_030 Hb_000813_120--Hb_012019_030 Hb_000813_120--Hb_001173_050 Hb_005993_070 Hb_005993_070 Hb_005731_080--Hb_005993_070 Hb_002743_030 Hb_002743_030 Hb_005731_080--Hb_002743_030 Hb_005731_080--Hb_006478_190 Hb_000365_300 Hb_000365_300 Hb_005731_080--Hb_000365_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.447758 0.0158499 0.0466459 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.72365 0

CAGE analysis