Hb_004195_070

Information

Type -
Description -
Location Contig4195: 93632-97216
Sequence    

Annotation

kegg
ID rcu:RCOM_0534840
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002521537.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q949P1
description Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1
trembl
ID B9S6B8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0534840 PE=3 SV=1
Gene Ontology
ID GO:0004497
description abscisic acid 8 -hydroxylase 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41412: 93472-94367 , PASA_asmbl_41413: 94404-95560 , PASA_asmbl_41414: 96029-96334 , PASA_asmbl_41415: 96165-96432 , PASA_asmbl_41416: 96521-97042
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_070 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000022_080 0.1049549027 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
3 Hb_162472_010 0.1066295973 - - conserved hypothetical protein [Ricinus communis]
4 Hb_033720_030 0.1142309855 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
5 Hb_001025_130 0.1177856897 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
6 Hb_026218_010 0.119827842 - - conserved hypothetical protein [Ricinus communis]
7 Hb_006483_070 0.1392987524 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
8 Hb_000586_110 0.1400271097 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
9 Hb_001709_120 0.1401693448 - - hypothetical protein RCOM_1313640 [Ricinus communis]
10 Hb_000320_010 0.1409022494 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005731_040 0.1410656021 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
12 Hb_005496_040 0.1458086843 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
13 Hb_000363_390 0.1476627767 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
14 Hb_002276_080 0.1494747427 - - Protein bem46, putative [Ricinus communis]
15 Hb_015292_020 0.1507554959 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_001136_080 0.1512887748 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
17 Hb_002636_120 0.1517135025 - - Protein bem46, putative [Ricinus communis]
18 Hb_000077_280 0.1540651616 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_002045_210 0.1542472471 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
20 Hb_097292_010 0.1547239729 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]

Gene co-expression network

sample Hb_004195_070 Hb_004195_070 Hb_000022_080 Hb_000022_080 Hb_004195_070--Hb_000022_080 Hb_162472_010 Hb_162472_010 Hb_004195_070--Hb_162472_010 Hb_033720_030 Hb_033720_030 Hb_004195_070--Hb_033720_030 Hb_001025_130 Hb_001025_130 Hb_004195_070--Hb_001025_130 Hb_026218_010 Hb_026218_010 Hb_004195_070--Hb_026218_010 Hb_006483_070 Hb_006483_070 Hb_004195_070--Hb_006483_070 Hb_005496_040 Hb_005496_040 Hb_000022_080--Hb_005496_040 Hb_002045_210 Hb_002045_210 Hb_000022_080--Hb_002045_210 Hb_000321_170 Hb_000321_170 Hb_000022_080--Hb_000321_170 Hb_000441_130 Hb_000441_130 Hb_000022_080--Hb_000441_130 Hb_002818_060 Hb_002818_060 Hb_000022_080--Hb_002818_060 Hb_162472_010--Hb_001025_130 Hb_001975_110 Hb_001975_110 Hb_162472_010--Hb_001975_110 Hb_002276_080 Hb_002276_080 Hb_162472_010--Hb_002276_080 Hb_162472_010--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_162472_010--Hb_001709_120 Hb_000005_290 Hb_000005_290 Hb_162472_010--Hb_000005_290 Hb_033720_030--Hb_002276_080 Hb_033720_030--Hb_162472_010 Hb_004223_060 Hb_004223_060 Hb_033720_030--Hb_004223_060 Hb_000922_400 Hb_000922_400 Hb_033720_030--Hb_000922_400 Hb_033720_030--Hb_001025_130 Hb_001025_130--Hb_001709_120 Hb_015292_020 Hb_015292_020 Hb_001025_130--Hb_015292_020 Hb_001025_130--Hb_006483_070 Hb_000586_110 Hb_000586_110 Hb_001025_130--Hb_000586_110 Hb_002902_060 Hb_002902_060 Hb_001025_130--Hb_002902_060 Hb_026218_010--Hb_000586_110 Hb_005731_040 Hb_005731_040 Hb_026218_010--Hb_005731_040 Hb_002636_120 Hb_002636_120 Hb_026218_010--Hb_002636_120 Hb_026218_010--Hb_001025_130 Hb_001775_140 Hb_001775_140 Hb_026218_010--Hb_001775_140 Hb_026218_010--Hb_001709_120 Hb_006483_070--Hb_001709_120 Hb_001136_080 Hb_001136_080 Hb_006483_070--Hb_001136_080 Hb_006483_070--Hb_015292_020 Hb_006483_070--Hb_001975_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0265674 0.272987 2.66683 4.21494 0.0763775 0.0698753
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0605076 0 0.0447654 0 0.897323

CAGE analysis