Hb_004195_110

Information

Type -
Description -
Location Contig4195: 126429-128448
Sequence    

Annotation

kegg
ID rcu:RCOM_0534670
description Mitochondrial chaperone BCS1, putative
nr
ID KDP25709.1
description hypothetical protein JCGZ_24010 [Jatropha curcas]
swissprot
ID Q54DY9
description Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1
trembl
ID A0A067K1S4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24010 PE=3 SV=1
Gene Ontology
ID GO:0005524
description mitochondrial chaperone

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41420: 126453-128393
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_110 0.0 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
2 Hb_000670_110 0.1422741783 - - l-asparaginase, putative [Ricinus communis]
3 Hb_001248_030 0.1534101173 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_002304_140 0.155043609 - - ring finger protein, putative [Ricinus communis]
5 Hb_004657_040 0.161588793 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
6 Hb_007416_150 0.1663507492 - - sarcosine oxidase, putative [Ricinus communis]
7 Hb_000181_160 0.1706940398 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
8 Hb_001408_050 0.1729060431 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000645_210 0.1765320071 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
10 Hb_000098_310 0.1768229056 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
11 Hb_009823_010 0.1768870793 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
12 Hb_000556_110 0.1777790967 - - hypothetical protein POPTR_0014s06790g [Populus trichocarpa]
13 Hb_007259_040 0.1890738141 - - hypothetical protein VITISV_005492 [Vitis vinifera]
14 Hb_011618_040 0.1902294503 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001951_090 0.1911462354 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_001206_090 0.191788744 - - pyruvate decarboxylase [Hevea brasiliensis]
17 Hb_003576_050 0.193866737 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
18 Hb_070277_010 0.1976397097 - - PREDICTED: purine permease 3-like [Jatropha curcas]
19 Hb_000625_060 0.198551991 - - Protein P21, putative [Ricinus communis]
20 Hb_011970_040 0.1995779704 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004195_110 Hb_004195_110 Hb_000670_110 Hb_000670_110 Hb_004195_110--Hb_000670_110 Hb_001248_030 Hb_001248_030 Hb_004195_110--Hb_001248_030 Hb_002304_140 Hb_002304_140 Hb_004195_110--Hb_002304_140 Hb_004657_040 Hb_004657_040 Hb_004195_110--Hb_004657_040 Hb_007416_150 Hb_007416_150 Hb_004195_110--Hb_007416_150 Hb_000181_160 Hb_000181_160 Hb_004195_110--Hb_000181_160 Hb_011970_040 Hb_011970_040 Hb_000670_110--Hb_011970_040 Hb_000106_070 Hb_000106_070 Hb_000670_110--Hb_000106_070 Hb_003052_200 Hb_003052_200 Hb_000670_110--Hb_003052_200 Hb_011618_040 Hb_011618_040 Hb_000670_110--Hb_011618_040 Hb_000670_110--Hb_001248_030 Hb_001248_030--Hb_007416_150 Hb_009823_010 Hb_009823_010 Hb_001248_030--Hb_009823_010 Hb_003576_050 Hb_003576_050 Hb_001248_030--Hb_003576_050 Hb_001408_050 Hb_001408_050 Hb_001248_030--Hb_001408_050 Hb_000638_090 Hb_000638_090 Hb_001248_030--Hb_000638_090 Hb_001248_030--Hb_002304_140 Hb_002304_140--Hb_007416_150 Hb_002304_140--Hb_009823_010 Hb_000165_210 Hb_000165_210 Hb_002304_140--Hb_000165_210 Hb_000098_310 Hb_000098_310 Hb_002304_140--Hb_000098_310 Hb_004657_040--Hb_000181_160 Hb_000625_060 Hb_000625_060 Hb_004657_040--Hb_000625_060 Hb_002686_390 Hb_002686_390 Hb_004657_040--Hb_002686_390 Hb_004657_040--Hb_001408_050 Hb_001514_210 Hb_001514_210 Hb_004657_040--Hb_001514_210 Hb_004657_040--Hb_009823_010 Hb_007416_150--Hb_011970_040 Hb_007416_150--Hb_009823_010 Hb_007416_150--Hb_003576_050 Hb_000181_160--Hb_001408_050 Hb_000181_160--Hb_009823_010 Hb_001454_410 Hb_001454_410 Hb_000181_160--Hb_001454_410 Hb_001221_480 Hb_001221_480 Hb_000181_160--Hb_001221_480 Hb_000181_160--Hb_000098_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.12135 22.9241 4.26277 4.39763 0.995439 1.01779
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.21802 3.66251 2.23541 38.3837 0.679114

CAGE analysis