Hb_004204_050

Information

Type -
Description -
Location Contig4204: 34098-35100
Sequence    

Annotation

kegg
ID rcu:RCOM_1470400
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002514682.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID Q9SGA8
description UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1
trembl
ID B9RLR3
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_1470400 PE=4 SV=1
Gene Ontology
ID GO:0035251
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41518: 32989-33412 , PASA_asmbl_41519: 33936-34373
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004204_050 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_002631_320 0.1272116929 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
3 Hb_007403_110 0.1813086485 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]
4 Hb_000291_030 0.1923998948 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
5 Hb_004712_170 0.1976545568 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
6 Hb_001377_360 0.201498456 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
7 Hb_025214_090 0.2082961344 - - clathrin assembly protein, putative [Ricinus communis]
8 Hb_000866_280 0.2094955784 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
9 Hb_002974_040 0.2109551472 - - GRF zinc finger containing protein [Medicago truncatula]
10 Hb_010883_200 0.213734178 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
11 Hb_063805_010 0.2206302196 - - -
12 Hb_087086_020 0.2243153497 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
13 Hb_000152_510 0.2244340038 - - kinase, putative [Ricinus communis]
14 Hb_004375_080 0.2258142275 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
15 Hb_022693_050 0.2328714185 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
16 Hb_004236_030 0.234374088 - - unknown [Lotus japonicus]
17 Hb_185516_010 0.2358320865 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
18 Hb_092337_020 0.2360010599 - - hypothetical protein B456_013G264900 [Gossypium raimondii]
19 Hb_000904_130 0.236715884 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
20 Hb_000059_340 0.2369163063 transcription factor TF Family: SOH1 uncharacterized protein LOC100527879 [Glycine max]

Gene co-expression network

sample Hb_004204_050 Hb_004204_050 Hb_002631_320 Hb_002631_320 Hb_004204_050--Hb_002631_320 Hb_007403_110 Hb_007403_110 Hb_004204_050--Hb_007403_110 Hb_000291_030 Hb_000291_030 Hb_004204_050--Hb_000291_030 Hb_004712_170 Hb_004712_170 Hb_004204_050--Hb_004712_170 Hb_001377_360 Hb_001377_360 Hb_004204_050--Hb_001377_360 Hb_025214_090 Hb_025214_090 Hb_004204_050--Hb_025214_090 Hb_002631_320--Hb_000291_030 Hb_004635_030 Hb_004635_030 Hb_002631_320--Hb_004635_030 Hb_002478_040 Hb_002478_040 Hb_002631_320--Hb_002478_040 Hb_002631_320--Hb_001377_360 Hb_000011_050 Hb_000011_050 Hb_002631_320--Hb_000011_050 Hb_007403_110--Hb_001377_360 Hb_007403_110--Hb_000291_030 Hb_008695_090 Hb_008695_090 Hb_007403_110--Hb_008695_090 Hb_002228_110 Hb_002228_110 Hb_007403_110--Hb_002228_110 Hb_000084_030 Hb_000084_030 Hb_007403_110--Hb_000084_030 Hb_004724_220 Hb_004724_220 Hb_007403_110--Hb_004724_220 Hb_000291_030--Hb_000011_050 Hb_000579_190 Hb_000579_190 Hb_000291_030--Hb_000579_190 Hb_000979_060 Hb_000979_060 Hb_000291_030--Hb_000979_060 Hb_000291_030--Hb_004635_030 Hb_004236_030 Hb_004236_030 Hb_000291_030--Hb_004236_030 Hb_004712_170--Hb_007403_110 Hb_004712_170--Hb_025214_090 Hb_004712_170--Hb_001377_360 Hb_004712_170--Hb_002631_320 Hb_000179_240 Hb_000179_240 Hb_004712_170--Hb_000179_240 Hb_001377_360--Hb_004724_220 Hb_001377_360--Hb_000291_030 Hb_001477_070 Hb_001477_070 Hb_001377_360--Hb_001477_070 Hb_001377_360--Hb_004635_030 Hb_001377_360--Hb_002228_110 Hb_000152_510 Hb_000152_510 Hb_025214_090--Hb_000152_510 Hb_025214_090--Hb_002631_320 Hb_007592_020 Hb_007592_020 Hb_025214_090--Hb_007592_020 Hb_007441_110 Hb_007441_110 Hb_025214_090--Hb_007441_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.421852 0.88018 0.732967 0.0386217 0.2684 0.203605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0946384 0.446305 0.261827 0.0912846 0

CAGE analysis