Hb_004204_080

Information

Type -
Description -
Location Contig4204: 46868-53744
Sequence    

Annotation

kegg
ID rcu:RCOM_1470420
description diacylglycerol kinase, theta, putative (EC:2.7.1.107)
nr
ID XP_002514684.1
description diacylglycerol kinase, theta, putative [Ricinus communis]
swissprot
ID Q39017
description Diacylglycerol kinase 1 OS=Arabidopsis thaliana GN=DGK1 PE=1 SV=2
trembl
ID B9RLR5
description Diacylglycerol kinase OS=Ricinus communis GN=RCOM_1470420 PE=3 SV=1
Gene Ontology
ID GO:0005622
description diacylglycerol kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41523: 46197-53730
cDNA
(Sanger)
(ID:Location)		 006_L15.ab1: 46298-47382 , 009_N17.ab1: 46298-47464 , 022_F09.ab1: 46298-47342 , 040_M17.ab1: 46298-47451 , 051_F23.ab1: 46298-47389

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004204_080 0.0 - - diacylglycerol kinase, theta, putative [Ricinus communis]
2 Hb_001797_050 0.06192776 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Jatropha curcas]
3 Hb_005730_030 0.0720136822 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
4 Hb_005532_050 0.0726835681 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
5 Hb_000031_050 0.0727584942 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
6 Hb_022408_010 0.0729554727 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
7 Hb_001541_020 0.0739292249 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
8 Hb_002601_120 0.0750428666 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]
9 Hb_000207_390 0.0755523321 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
10 Hb_002200_130 0.0769737934 - - PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Jatropha curcas]
11 Hb_002154_030 0.0788129234 - - RNA binding protein, putative [Ricinus communis]
12 Hb_000803_190 0.0796355911 - - PREDICTED: THUMP domain-containing protein 1 isoform X1 [Jatropha curcas]
13 Hb_001728_100 0.0799677776 - - hypothetical protein JCGZ_03429 [Jatropha curcas]
14 Hb_007757_110 0.0809768012 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
15 Hb_000195_020 0.0824528039 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Jatropha curcas]
16 Hb_002307_100 0.0829643985 - - PREDICTED: protein transport protein sec23-1 [Jatropha curcas]
17 Hb_156850_030 0.0834487257 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
18 Hb_000953_010 0.0837032908 - - hypothetical protein CISIN_1g0425012mg, partial [Citrus sinensis]
19 Hb_004055_040 0.0843371068 - - Phospholipid-transporting ATPase, putative [Ricinus communis]
20 Hb_001301_200 0.0848145258 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]

Gene co-expression network

sample Hb_004204_080 Hb_004204_080 Hb_001797_050 Hb_001797_050 Hb_004204_080--Hb_001797_050 Hb_005730_030 Hb_005730_030 Hb_004204_080--Hb_005730_030 Hb_005532_050 Hb_005532_050 Hb_004204_080--Hb_005532_050 Hb_000031_050 Hb_000031_050 Hb_004204_080--Hb_000031_050 Hb_022408_010 Hb_022408_010 Hb_004204_080--Hb_022408_010 Hb_001541_020 Hb_001541_020 Hb_004204_080--Hb_001541_020 Hb_004724_060 Hb_004724_060 Hb_001797_050--Hb_004724_060 Hb_000207_390 Hb_000207_390 Hb_001797_050--Hb_000207_390 Hb_007163_090 Hb_007163_090 Hb_001797_050--Hb_007163_090 Hb_009411_010 Hb_009411_010 Hb_001797_050--Hb_009411_010 Hb_000803_190 Hb_000803_190 Hb_001797_050--Hb_000803_190 Hb_004055_040 Hb_004055_040 Hb_005730_030--Hb_004055_040 Hb_140171_010 Hb_140171_010 Hb_005730_030--Hb_140171_010 Hb_000244_250 Hb_000244_250 Hb_005730_030--Hb_000244_250 Hb_002928_060 Hb_002928_060 Hb_005730_030--Hb_002928_060 Hb_005730_030--Hb_022408_010 Hb_003464_050 Hb_003464_050 Hb_005532_050--Hb_003464_050 Hb_001680_010 Hb_001680_010 Hb_005532_050--Hb_001680_010 Hb_001301_200 Hb_001301_200 Hb_005532_050--Hb_001301_200 Hb_005532_050--Hb_001797_050 Hb_008803_090 Hb_008803_090 Hb_005532_050--Hb_008803_090 Hb_005532_050--Hb_001541_020 Hb_006573_200 Hb_006573_200 Hb_000031_050--Hb_006573_200 Hb_006649_060 Hb_006649_060 Hb_000031_050--Hb_006649_060 Hb_000077_230 Hb_000077_230 Hb_000031_050--Hb_000077_230 Hb_007757_110 Hb_007757_110 Hb_000031_050--Hb_007757_110 Hb_124315_020 Hb_124315_020 Hb_000031_050--Hb_124315_020 Hb_022408_010--Hb_001541_020 Hb_022408_010--Hb_000244_250 Hb_002255_050 Hb_002255_050 Hb_022408_010--Hb_002255_050 Hb_002221_050 Hb_002221_050 Hb_022408_010--Hb_002221_050 Hb_000424_010 Hb_000424_010 Hb_022408_010--Hb_000424_010 Hb_000107_500 Hb_000107_500 Hb_022408_010--Hb_000107_500 Hb_001541_020--Hb_000107_500 Hb_001541_020--Hb_002221_050 Hb_001541_020--Hb_000244_250 Hb_004162_280 Hb_004162_280 Hb_001541_020--Hb_004162_280 Hb_002301_220 Hb_002301_220 Hb_001541_020--Hb_002301_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.2625 23.3174 10.0476 11.9673 36.437 40.0045
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.2741 15.3276 30.1861 11.5317 7.99946

CAGE analysis