Hb_004218_060

Information

Type -
Description -
Location Contig4218: 60007-62139
Sequence    

Annotation

kegg
ID rcu:RCOM_1453020
description annexin, putative
nr
ID AJJ90390.1
description annexin [Manihot esculenta]
swissprot
ID Q9ZVJ6
description Annexin D4 OS=Arabidopsis thaliana GN=ANN4 PE=2 SV=1
trembl
ID A0A0C4ZR11
description Ann5 protein OS=Manihot esculenta GN=Ann5 PE=2 SV=1
Gene Ontology
ID GO:0009506
description annexin d4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41653: 60802-61657
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004218_060 0.0 - - annexin [Manihot esculenta]
2 Hb_005736_120 0.0822130347 - - PREDICTED: carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic [Gossypium raimondii]
3 Hb_145188_010 0.086269467 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
4 Hb_002710_040 0.0936927792 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
5 Hb_001942_060 0.0941978309 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007262_010 0.0990363508 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X2 [Jatropha curcas]
7 Hb_163950_090 0.0994155008 - - PREDICTED: traB domain-containing protein isoform X1 [Jatropha curcas]
8 Hb_003750_110 0.105934515 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
9 Hb_000362_080 0.1066091954 - - hypothetical protein EUTSA_v10027329mg, partial [Eutrema salsugineum]
10 Hb_000749_140 0.1068776904 - - PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal [Jatropha curcas]
11 Hb_000836_620 0.1117819517 - - PREDICTED: protochlorophyllide reductase, chloroplastic [Jatropha curcas]
12 Hb_006267_040 0.1133155 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
13 Hb_001233_050 0.1134098968 - - Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor, putative [Ricinus communis]
14 Hb_000080_070 0.1165795045 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
15 Hb_003683_170 0.1179300504 - - conserved hypothetical protein [Ricinus communis]
16 Hb_009846_010 0.1195420819 - - PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]
17 Hb_101133_030 0.1197492145 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
18 Hb_008221_190 0.1220854766 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
19 Hb_001916_110 0.1243493757 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
20 Hb_001374_050 0.1260259917 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]

Gene co-expression network

sample Hb_004218_060 Hb_004218_060 Hb_005736_120 Hb_005736_120 Hb_004218_060--Hb_005736_120 Hb_145188_010 Hb_145188_010 Hb_004218_060--Hb_145188_010 Hb_002710_040 Hb_002710_040 Hb_004218_060--Hb_002710_040 Hb_001942_060 Hb_001942_060 Hb_004218_060--Hb_001942_060 Hb_007262_010 Hb_007262_010 Hb_004218_060--Hb_007262_010 Hb_163950_090 Hb_163950_090 Hb_004218_060--Hb_163950_090 Hb_005736_120--Hb_163950_090 Hb_005736_120--Hb_001942_060 Hb_000749_140 Hb_000749_140 Hb_005736_120--Hb_000749_140 Hb_001233_050 Hb_001233_050 Hb_005736_120--Hb_001233_050 Hb_003683_170 Hb_003683_170 Hb_005736_120--Hb_003683_170 Hb_145188_010--Hb_007262_010 Hb_145188_010--Hb_163950_090 Hb_145188_010--Hb_005736_120 Hb_001476_040 Hb_001476_040 Hb_145188_010--Hb_001476_040 Hb_000362_080 Hb_000362_080 Hb_145188_010--Hb_000362_080 Hb_001958_030 Hb_001958_030 Hb_002710_040--Hb_001958_030 Hb_003387_010 Hb_003387_010 Hb_002710_040--Hb_003387_010 Hb_000188_070 Hb_000188_070 Hb_002710_040--Hb_000188_070 Hb_002710_040--Hb_163950_090 Hb_002710_040--Hb_001942_060 Hb_001942_060--Hb_001233_050 Hb_001942_060--Hb_000749_140 Hb_101133_030 Hb_101133_030 Hb_001942_060--Hb_101133_030 Hb_002078_280 Hb_002078_280 Hb_001942_060--Hb_002078_280 Hb_000821_030 Hb_000821_030 Hb_001942_060--Hb_000821_030 Hb_004627_050 Hb_004627_050 Hb_001942_060--Hb_004627_050 Hb_003750_110 Hb_003750_110 Hb_007262_010--Hb_003750_110 Hb_000836_620 Hb_000836_620 Hb_007262_010--Hb_000836_620 Hb_007262_010--Hb_000362_080 Hb_007262_010--Hb_005736_120 Hb_163950_090--Hb_001942_060 Hb_163950_090--Hb_000749_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.455686 0.728121 57.4217 8.87039 0.154866 0.133452
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0413119 0.0324962 0 3.00793 31.0442

CAGE analysis