Hb_004218_070

Information

Type -
Description -
Location Contig4218: 63269-65410
Sequence    

Annotation

kegg
ID rcu:RCOM_1453010
description annexin, putative
nr
ID AJJ90394.1
description annexin [Manihot esculenta]
swissprot
ID P51074
description Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2
trembl
ID A0A0C4ZPU9
description Ann4 protein OS=Manihot esculenta GN=Ann4 PE=2 SV=1
Gene Ontology
ID GO:0005509
description annexin-like protein rj4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41657: 63229-65560
cDNA
(Sanger)
(ID:Location)		 003_N11.ab1: 63665-65210 , 006_O13.ab1: 63794-65205 , 015_H22.ab1: 63807-65205 , 025_H22.ab1: 63631-65210 , 026_P01.ab1: 64122-65205 , 030_P23.ab1: 63803-65205

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004218_070 0.0 - - annexin [Manihot esculenta]
2 Hb_001279_330 0.093871326 - - Protein bem46, putative [Ricinus communis]
3 Hb_007668_020 0.0956536491 - - PREDICTED: uncharacterized protein LOC105631102 [Jatropha curcas]
4 Hb_000213_070 0.0995961323 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
5 Hb_009913_050 0.1084167192 - - PREDICTED: partner of Y14 and mago-like [Jatropha curcas]
6 Hb_007757_100 0.1088650729 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
7 Hb_000199_080 0.1112101433 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008406_140 0.1128444667 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
9 Hb_005214_060 0.1142165515 - - catalytic, putative [Ricinus communis]
10 Hb_001040_120 0.1143159307 - - allantoinase, putative [Ricinus communis]
11 Hb_003716_020 0.1145465556 - - PREDICTED: putative vesicle-associated membrane protein 726 [Jatropha curcas]
12 Hb_000424_230 0.1168011622 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Glycine max]
13 Hb_000849_100 0.1170889377 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
14 Hb_002942_080 0.1174798549 - - PREDICTED: signal recognition particle subunit SRP68 [Jatropha curcas]
15 Hb_001501_060 0.1200291319 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002675_060 0.1202316837 - - PREDICTED: uncharacterized protein LOC105634954 isoform X2 [Jatropha curcas]
17 Hb_004920_060 0.123047558 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
18 Hb_015763_030 0.1245136629 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004143_070 0.1249244504 - - cytochrome P450, putative [Ricinus communis]
20 Hb_079326_010 0.1250949771 - - PREDICTED: uncharacterized protein LOC105630719 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004218_070 Hb_004218_070 Hb_001279_330 Hb_001279_330 Hb_004218_070--Hb_001279_330 Hb_007668_020 Hb_007668_020 Hb_004218_070--Hb_007668_020 Hb_000213_070 Hb_000213_070 Hb_004218_070--Hb_000213_070 Hb_009913_050 Hb_009913_050 Hb_004218_070--Hb_009913_050 Hb_007757_100 Hb_007757_100 Hb_004218_070--Hb_007757_100 Hb_000199_080 Hb_000199_080 Hb_004218_070--Hb_000199_080 Hb_001279_330--Hb_007757_100 Hb_000424_230 Hb_000424_230 Hb_001279_330--Hb_000424_230 Hb_005368_010 Hb_005368_010 Hb_001279_330--Hb_005368_010 Hb_005271_080 Hb_005271_080 Hb_001279_330--Hb_005271_080 Hb_008406_140 Hb_008406_140 Hb_001279_330--Hb_008406_140 Hb_001278_060 Hb_001278_060 Hb_007668_020--Hb_001278_060 Hb_005129_050 Hb_005129_050 Hb_007668_020--Hb_005129_050 Hb_007668_020--Hb_000213_070 Hb_003581_020 Hb_003581_020 Hb_007668_020--Hb_003581_020 Hb_003716_020 Hb_003716_020 Hb_007668_020--Hb_003716_020 Hb_007668_020--Hb_000199_080 Hb_000213_070--Hb_001278_060 Hb_006002_030 Hb_006002_030 Hb_000213_070--Hb_006002_030 Hb_000331_190 Hb_000331_190 Hb_000213_070--Hb_000331_190 Hb_002675_060 Hb_002675_060 Hb_000213_070--Hb_002675_060 Hb_078477_040 Hb_078477_040 Hb_000213_070--Hb_078477_040 Hb_005214_060 Hb_005214_060 Hb_009913_050--Hb_005214_060 Hb_002942_080 Hb_002942_080 Hb_009913_050--Hb_002942_080 Hb_000318_140 Hb_000318_140 Hb_009913_050--Hb_000318_140 Hb_001396_290 Hb_001396_290 Hb_009913_050--Hb_001396_290 Hb_002048_090 Hb_002048_090 Hb_009913_050--Hb_002048_090 Hb_025557_020 Hb_025557_020 Hb_009913_050--Hb_025557_020 Hb_000181_310 Hb_000181_310 Hb_007757_100--Hb_000181_310 Hb_003580_040 Hb_003580_040 Hb_007757_100--Hb_003580_040 Hb_007757_100--Hb_007668_020 Hb_007757_100--Hb_000199_080 Hb_007757_100--Hb_009913_050 Hb_079326_010 Hb_079326_010 Hb_000199_080--Hb_079326_010 Hb_000199_080--Hb_003581_020 Hb_000199_080--Hb_008406_140 Hb_002159_040 Hb_002159_040 Hb_000199_080--Hb_002159_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1535.84 397.326 401.475 666.635 1496.42 1650.89
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
619.175 230.666 154.444 460.462 156.062

CAGE analysis