Hb_004223_050

Information

Type -
Description -
Location Contig4223: 21986-25397
Sequence    

Annotation

kegg
ID rcu:RCOM_1597800
description hexokinase, putative (EC:2.7.1.1)
nr
ID AHY84730.1
description hexokinase [Manihot esculenta]
swissprot
ID Q6Q8A5
description Hexokinase-2, chloroplastic OS=Nicotiana tabacum GN=HXK2 PE=2 SV=1
trembl
ID A0A023ZZS7
description Hexokinase OS=Manihot esculenta GN=HXK1 PE=2 SV=1
Gene Ontology
ID GO:0004396
description hexokinase- chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41755: 22016-23906 , PASA_asmbl_41756: 23913-25193
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004223_050 0.0 - - hexokinase [Manihot esculenta]
2 Hb_000127_140 0.0856702291 - - transporter-related family protein [Populus trichocarpa]
3 Hb_004754_050 0.0894452208 - - PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
4 Hb_000721_030 0.0919883633 rubber biosynthesis Gene Name: Mevalonate diphosphate decarboxylase mevalonate diphosphate decarboxylase [Hevea brasiliensis]
5 Hb_010931_130 0.0983596007 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
6 Hb_012258_010 0.0985477393 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
7 Hb_001195_060 0.1012019888 - - Protein yrdA, putative [Ricinus communis]
8 Hb_001269_330 0.1030258961 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
9 Hb_027380_060 0.1038016002 - - PREDICTED: putative ALA-interacting subunit 2 [Jatropha curcas]
10 Hb_007975_060 0.1061183497 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
11 Hb_001136_070 0.1061364277 - - Transmembrane protein TPARL, putative [Ricinus communis]
12 Hb_000666_100 0.1075633897 - - Actin-related protein 2/3 complex subunit 2 isoform 2 [Theobroma cacao]
13 Hb_000058_130 0.1078958032 - - PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]
14 Hb_001087_030 0.1090897011 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
15 Hb_004545_110 0.1095449065 - - DHHC-type zinc finger family protein isoform 1 [Theobroma cacao]
16 Hb_133702_010 0.1097783973 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
17 Hb_001799_030 0.1098332477 - - PREDICTED: ELMO domain-containing protein C-like [Jatropha curcas]
18 Hb_001951_130 0.1110905866 - - PREDICTED: coatomer subunit zeta-1-like [Jatropha curcas]
19 Hb_002304_150 0.1113155963 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
20 Hb_030736_020 0.1120534705 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004223_050 Hb_004223_050 Hb_000127_140 Hb_000127_140 Hb_004223_050--Hb_000127_140 Hb_004754_050 Hb_004754_050 Hb_004223_050--Hb_004754_050 Hb_000721_030 Hb_000721_030 Hb_004223_050--Hb_000721_030 Hb_010931_130 Hb_010931_130 Hb_004223_050--Hb_010931_130 Hb_012258_010 Hb_012258_010 Hb_004223_050--Hb_012258_010 Hb_001195_060 Hb_001195_060 Hb_004223_050--Hb_001195_060 Hb_007894_010 Hb_007894_010 Hb_000127_140--Hb_007894_010 Hb_008147_090 Hb_008147_090 Hb_000127_140--Hb_008147_090 Hb_001951_130 Hb_001951_130 Hb_000127_140--Hb_001951_130 Hb_000127_140--Hb_001195_060 Hb_000666_100 Hb_000666_100 Hb_000127_140--Hb_000666_100 Hb_002184_090 Hb_002184_090 Hb_000127_140--Hb_002184_090 Hb_007975_060 Hb_007975_060 Hb_004754_050--Hb_007975_060 Hb_002157_120 Hb_002157_120 Hb_004754_050--Hb_002157_120 Hb_019181_040 Hb_019181_040 Hb_004754_050--Hb_019181_040 Hb_133702_010 Hb_133702_010 Hb_004754_050--Hb_133702_010 Hb_001087_030 Hb_001087_030 Hb_004754_050--Hb_001087_030 Hb_000058_130 Hb_000058_130 Hb_004754_050--Hb_000058_130 Hb_000721_030--Hb_133702_010 Hb_004452_120 Hb_004452_120 Hb_000721_030--Hb_004452_120 Hb_005800_030 Hb_005800_030 Hb_000721_030--Hb_005800_030 Hb_001946_390 Hb_001946_390 Hb_000721_030--Hb_001946_390 Hb_012573_050 Hb_012573_050 Hb_000721_030--Hb_012573_050 Hb_001504_030 Hb_001504_030 Hb_000721_030--Hb_001504_030 Hb_000375_350 Hb_000375_350 Hb_010931_130--Hb_000375_350 Hb_000925_130 Hb_000925_130 Hb_010931_130--Hb_000925_130 Hb_003052_050 Hb_003052_050 Hb_010931_130--Hb_003052_050 Hb_010931_130--Hb_004754_050 Hb_023371_020 Hb_023371_020 Hb_010931_130--Hb_023371_020 Hb_000599_250 Hb_000599_250 Hb_010931_130--Hb_000599_250 Hb_012258_010--Hb_000375_350 Hb_002304_150 Hb_002304_150 Hb_012258_010--Hb_002304_150 Hb_001799_030 Hb_001799_030 Hb_012258_010--Hb_001799_030 Hb_001300_150 Hb_001300_150 Hb_012258_010--Hb_001300_150 Hb_000345_310 Hb_000345_310 Hb_012258_010--Hb_000345_310 Hb_171376_010 Hb_171376_010 Hb_012258_010--Hb_171376_010 Hb_005167_010 Hb_005167_010 Hb_001195_060--Hb_005167_010 Hb_000920_200 Hb_000920_200 Hb_001195_060--Hb_000920_200 Hb_005765_050 Hb_005765_050 Hb_001195_060--Hb_005765_050 Hb_012799_170 Hb_012799_170 Hb_001195_060--Hb_012799_170 Hb_004545_110 Hb_004545_110 Hb_001195_060--Hb_004545_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.66955 2.92833 13.033 17.2735 8.94444 5.90232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.4627 7.79642 10.4559 5.69201 9.37973

CAGE analysis