Hb_004225_160

Information

Type -
Description -
Location Contig4225: 167272-167922
Sequence    

Annotation

kegg
ID rcu:RCOM_0544940
description Kiwellin, putative
nr
ID XP_012064771.1
description PREDICTED: kiwellin-like [Jatropha curcas]
swissprot
ID P84527
description Kiwellin OS=Actinidia deliciosa PE=1 SV=1
trembl
ID A0A067L6G3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05484 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004225_160 0.0 - - PREDICTED: kiwellin-like [Jatropha curcas]
2 Hb_007245_030 0.0710809949 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000038_070 0.0881167605 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004422_030 0.0881517369 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
5 Hb_000614_200 0.0894058043 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]
6 Hb_006573_310 0.0906553023 - - Tellurite resistance protein tehA, putative [Ricinus communis]
7 Hb_027905_040 0.0979136249 transcription factor TF Family: E2F-DP PREDICTED: E2F transcription factor-like E2FF [Jatropha curcas]
8 Hb_000316_070 0.0979625177 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
9 Hb_000890_140 0.1009792001 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
10 Hb_000856_390 0.1016597628 - - conserved hypothetical protein [Ricinus communis]
11 Hb_011849_010 0.1017179504 - - PREDICTED: kinesin-like protein KIFC3 isoform X4 [Jatropha curcas]
12 Hb_005914_100 0.1045707247 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001439_240 0.1069897188 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
14 Hb_002374_090 0.1115893584 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
15 Hb_007474_020 0.1118533025 - - multicopper oxidase, putative [Ricinus communis]
16 Hb_004241_160 0.1154171222 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-7 [Jatropha curcas]
17 Hb_000116_050 0.1170401317 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
18 Hb_001168_030 0.1178468922 - - PREDICTED: G2/mitotic-specific cyclin S13-7 [Jatropha curcas]
19 Hb_004097_030 0.117949678 - - PREDICTED: uncharacterized protein LOC105634518 [Jatropha curcas]
20 Hb_000340_550 0.1189361543 - - PREDICTED: rho GTPase-activating protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_004225_160 Hb_004225_160 Hb_007245_030 Hb_007245_030 Hb_004225_160--Hb_007245_030 Hb_000038_070 Hb_000038_070 Hb_004225_160--Hb_000038_070 Hb_004422_030 Hb_004422_030 Hb_004225_160--Hb_004422_030 Hb_000614_200 Hb_000614_200 Hb_004225_160--Hb_000614_200 Hb_006573_310 Hb_006573_310 Hb_004225_160--Hb_006573_310 Hb_027905_040 Hb_027905_040 Hb_004225_160--Hb_027905_040 Hb_005914_100 Hb_005914_100 Hb_007245_030--Hb_005914_100 Hb_007245_030--Hb_000614_200 Hb_001168_030 Hb_001168_030 Hb_007245_030--Hb_001168_030 Hb_000316_070 Hb_000316_070 Hb_007245_030--Hb_000316_070 Hb_002928_150 Hb_002928_150 Hb_007245_030--Hb_002928_150 Hb_011849_010 Hb_011849_010 Hb_000038_070--Hb_011849_010 Hb_000085_360 Hb_000085_360 Hb_000038_070--Hb_000085_360 Hb_000856_390 Hb_000856_390 Hb_000038_070--Hb_000856_390 Hb_002374_090 Hb_002374_090 Hb_000038_070--Hb_002374_090 Hb_181744_010 Hb_181744_010 Hb_000038_070--Hb_181744_010 Hb_003106_090 Hb_003106_090 Hb_000038_070--Hb_003106_090 Hb_002918_220 Hb_002918_220 Hb_004422_030--Hb_002918_220 Hb_000083_280 Hb_000083_280 Hb_004422_030--Hb_000083_280 Hb_001439_240 Hb_001439_240 Hb_004422_030--Hb_001439_240 Hb_039812_010 Hb_039812_010 Hb_004422_030--Hb_039812_010 Hb_010267_020 Hb_010267_020 Hb_004422_030--Hb_010267_020 Hb_003776_050 Hb_003776_050 Hb_000614_200--Hb_003776_050 Hb_000614_200--Hb_011849_010 Hb_000614_200--Hb_002374_090 Hb_119044_040 Hb_119044_040 Hb_000614_200--Hb_119044_040 Hb_003398_050 Hb_003398_050 Hb_000614_200--Hb_003398_050 Hb_004774_080 Hb_004774_080 Hb_006573_310--Hb_004774_080 Hb_006573_310--Hb_007245_030 Hb_006573_310--Hb_005914_100 Hb_004241_160 Hb_004241_160 Hb_006573_310--Hb_004241_160 Hb_078448_010 Hb_078448_010 Hb_006573_310--Hb_078448_010 Hb_000527_020 Hb_000527_020 Hb_006573_310--Hb_000527_020 Hb_002686_070 Hb_002686_070 Hb_027905_040--Hb_002686_070 Hb_027905_040--Hb_000316_070 Hb_000189_350 Hb_000189_350 Hb_027905_040--Hb_000189_350 Hb_027905_040--Hb_000614_200 Hb_027905_040--Hb_011849_010 Hb_064396_010 Hb_064396_010 Hb_027905_040--Hb_064396_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.197241 2.80841 1.26004 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.115062 0.138028

CAGE analysis