Hb_004242_090

Information

Type -
Description -
Location Contig4242: 82782-88362
Sequence    

Annotation

kegg
ID pop:POPTR_0001s44040g
description linamarase family protein
nr
ID KDP39010.1
description hypothetical protein JCGZ_00767 [Jatropha curcas]
swissprot
ID Q9FIU7
description Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2
trembl
ID A0A067L3C8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00767 PE=3 SV=1
Gene Ontology
ID GO:0009505
description beta-glucosidase 41

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41962: 83377-83913
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004242_090 0.0 - - hypothetical protein JCGZ_00767 [Jatropha curcas]
2 Hb_001278_020 0.140607897 - - sucrose synthase 6 [Hevea brasiliensis]
3 Hb_002999_070 0.1506507735 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
4 Hb_001486_280 0.1511891204 - - hypothetical protein RCOM_1321910 [Ricinus communis]
5 Hb_003929_240 0.1540269461 - - PREDICTED: uncharacterized protein LOC105643616 isoform X2 [Jatropha curcas]
6 Hb_004375_120 0.1590359531 - - PREDICTED: dnaJ homolog subfamily B member 3-like [Jatropha curcas]
7 Hb_003462_040 0.1594772222 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_002820_150 0.1628594542 - - zinc finger protein, putative [Ricinus communis]
9 Hb_000012_330 0.1653033305 - - pollen specific protein sf21, putative [Ricinus communis]
10 Hb_000270_380 0.166930631 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
11 Hb_005295_020 0.1691573054 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Populus euphratica]
12 Hb_000056_110 0.1718227459 - - PREDICTED: uncharacterized protein LOC105630405 [Jatropha curcas]
13 Hb_002542_060 0.1718315215 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
14 Hb_000622_050 0.1727500472 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003768_020 0.1760788703 - - PREDICTED: uncharacterized protein LOC105644157 [Jatropha curcas]
16 Hb_001951_080 0.1781887949 - - O-acetyltransferase, putative [Ricinus communis]
17 Hb_000152_530 0.1781981897 - - hypothetical protein SELMODRAFT_231485 [Selaginella moellendorffii]
18 Hb_003177_040 0.1790638028 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
19 Hb_004531_170 0.1796296872 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
20 Hb_119044_010 0.1802125294 - - PREDICTED: stomatal closure-related actin-binding protein 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_004242_090 Hb_004242_090 Hb_001278_020 Hb_001278_020 Hb_004242_090--Hb_001278_020 Hb_002999_070 Hb_002999_070 Hb_004242_090--Hb_002999_070 Hb_001486_280 Hb_001486_280 Hb_004242_090--Hb_001486_280 Hb_003929_240 Hb_003929_240 Hb_004242_090--Hb_003929_240 Hb_004375_120 Hb_004375_120 Hb_004242_090--Hb_004375_120 Hb_003462_040 Hb_003462_040 Hb_004242_090--Hb_003462_040 Hb_000661_270 Hb_000661_270 Hb_001278_020--Hb_000661_270 Hb_000008_070 Hb_000008_070 Hb_001278_020--Hb_000008_070 Hb_000358_090 Hb_000358_090 Hb_001278_020--Hb_000358_090 Hb_001541_200 Hb_001541_200 Hb_001278_020--Hb_001541_200 Hb_001657_020 Hb_001657_020 Hb_001278_020--Hb_001657_020 Hb_005295_020 Hb_005295_020 Hb_001278_020--Hb_005295_020 Hb_000270_380 Hb_000270_380 Hb_002999_070--Hb_000270_380 Hb_002999_070--Hb_001486_280 Hb_002485_010 Hb_002485_010 Hb_002999_070--Hb_002485_010 Hb_002999_070--Hb_004375_120 Hb_000345_550 Hb_000345_550 Hb_002999_070--Hb_000345_550 Hb_001951_080 Hb_001951_080 Hb_002999_070--Hb_001951_080 Hb_001486_280--Hb_000270_380 Hb_012098_160 Hb_012098_160 Hb_001486_280--Hb_012098_160 Hb_009023_010 Hb_009023_010 Hb_001486_280--Hb_009023_010 Hb_001486_280--Hb_002485_010 Hb_000904_120 Hb_000904_120 Hb_001486_280--Hb_000904_120 Hb_012484_050 Hb_012484_050 Hb_001486_280--Hb_012484_050 Hb_001257_050 Hb_001257_050 Hb_003929_240--Hb_001257_050 Hb_000005_370 Hb_000005_370 Hb_003929_240--Hb_000005_370 Hb_003018_150 Hb_003018_150 Hb_003929_240--Hb_003018_150 Hb_006750_010 Hb_006750_010 Hb_003929_240--Hb_006750_010 Hb_001699_080 Hb_001699_080 Hb_003929_240--Hb_001699_080 Hb_000103_130 Hb_000103_130 Hb_003929_240--Hb_000103_130 Hb_000336_290 Hb_000336_290 Hb_004375_120--Hb_000336_290 Hb_004375_120--Hb_000270_380 Hb_004375_120--Hb_001486_280 Hb_000622_050 Hb_000622_050 Hb_004375_120--Hb_000622_050 Hb_002182_010 Hb_002182_010 Hb_004375_120--Hb_002182_010 Hb_001369_010 Hb_001369_010 Hb_003462_040--Hb_001369_010 Hb_003462_040--Hb_006750_010 Hb_003006_090 Hb_003006_090 Hb_003462_040--Hb_003006_090 Hb_019516_060 Hb_019516_060 Hb_003462_040--Hb_019516_060 Hb_003226_250 Hb_003226_250 Hb_003462_040--Hb_003226_250 Hb_001195_660 Hb_001195_660 Hb_003462_040--Hb_001195_660
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.285972 0.401804 1.07566 2.26405 0.226451 0.0107961
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0280435 0 0.083189 0.0879623 2.40917

CAGE analysis