Hb_004291_060

Information

Type -
Description -
Location Contig4291: 151939-158440
Sequence    

Annotation

kegg
ID eus:EUTSA_v100036150m
description hypothetical protein
nr
ID EMT20976.1
description hypothetical protein F775_42457 [Aegilops tauschii]
swissprot
ID -
description -
trembl
ID M8CCW4
description Uncharacterized protein OS=Aegilops tauschii GN=F775_42457 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004291_060 0.0 - - hypothetical protein F775_42457 [Aegilops tauschii]
2 Hb_000193_090 0.1058988622 - - cysteine protease, putative [Ricinus communis]
3 Hb_002474_020 0.1117316086 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104585652 [Nelumbo nucifera]
4 Hb_003559_010 0.1166583288 - - Peroxidase 27 precursor, putative [Ricinus communis]
5 Hb_001221_250 0.1175732756 - - -
6 Hb_067971_010 0.1271937367 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_007590_030 0.1404801824 - - PREDICTED: iridoid synthase [Jatropha curcas]
8 Hb_000920_340 0.1475273776 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_140595_030 0.1600185564 - - -
10 Hb_149345_010 0.1607367618 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_000758_060 0.1625703276 - - PREDICTED: GDSL esterase/lipase At5g45960 [Jatropha curcas]
12 Hb_002764_020 0.1677886983 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
13 Hb_019925_010 0.1692569596 - - PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
14 Hb_000155_230 0.1692756847 - - rac gtpase, putative [Ricinus communis]
15 Hb_027969_010 0.16960771 - - hypothetical protein JCGZ_24556 [Jatropha curcas]
16 Hb_101705_040 0.1720615836 - - cytochrome P450, putative [Ricinus communis]
17 Hb_000247_060 0.1753476306 transcription factor TF Family: bHLH PREDICTED: transcription factor ORG2-like isoform X1 [Jatropha curcas]
18 Hb_007718_040 0.1764380728 - - hypothetical protein PRUPE_ppb025054mg [Prunus persica]
19 Hb_003253_030 0.1778208574 - - lysosomal pro-X carboxypeptidase, putative [Ricinus communis]
20 Hb_009004_020 0.1792524022 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_004291_060 Hb_004291_060 Hb_000193_090 Hb_000193_090 Hb_004291_060--Hb_000193_090 Hb_002474_020 Hb_002474_020 Hb_004291_060--Hb_002474_020 Hb_003559_010 Hb_003559_010 Hb_004291_060--Hb_003559_010 Hb_001221_250 Hb_001221_250 Hb_004291_060--Hb_001221_250 Hb_067971_010 Hb_067971_010 Hb_004291_060--Hb_067971_010 Hb_007590_030 Hb_007590_030 Hb_004291_060--Hb_007590_030 Hb_000193_090--Hb_001221_250 Hb_000193_090--Hb_007590_030 Hb_125181_010 Hb_125181_010 Hb_000193_090--Hb_125181_010 Hb_011358_010 Hb_011358_010 Hb_000193_090--Hb_011358_010 Hb_112791_030 Hb_112791_030 Hb_000193_090--Hb_112791_030 Hb_001267_020 Hb_001267_020 Hb_002474_020--Hb_001267_020 Hb_002474_020--Hb_003559_010 Hb_000247_060 Hb_000247_060 Hb_002474_020--Hb_000247_060 Hb_000450_110 Hb_000450_110 Hb_002474_020--Hb_000450_110 Hb_000138_180 Hb_000138_180 Hb_002474_020--Hb_000138_180 Hb_003559_010--Hb_067971_010 Hb_000758_060 Hb_000758_060 Hb_003559_010--Hb_000758_060 Hb_000920_340 Hb_000920_340 Hb_003559_010--Hb_000920_340 Hb_002764_020 Hb_002764_020 Hb_003559_010--Hb_002764_020 Hb_001221_250--Hb_125181_010 Hb_019925_010 Hb_019925_010 Hb_001221_250--Hb_019925_010 Hb_001221_250--Hb_007590_030 Hb_044380_010 Hb_044380_010 Hb_001221_250--Hb_044380_010 Hb_032050_030 Hb_032050_030 Hb_067971_010--Hb_032050_030 Hb_030370_080 Hb_030370_080 Hb_067971_010--Hb_030370_080 Hb_002112_030 Hb_002112_030 Hb_067971_010--Hb_002112_030 Hb_153625_010 Hb_153625_010 Hb_067971_010--Hb_153625_010 Hb_000152_400 Hb_000152_400 Hb_067971_010--Hb_000152_400 Hb_002447_100 Hb_002447_100 Hb_007590_030--Hb_002447_100 Hb_007590_030--Hb_125181_010 Hb_004530_010 Hb_004530_010 Hb_007590_030--Hb_004530_010 Hb_007590_030--Hb_112791_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0417719 0 0.164187 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.015072 0.616166

CAGE analysis