Hb_004307_070

Information

Type -
Description -
Location Contig4307: 43915-45882
Sequence    

Annotation

kegg
ID rcu:RCOM_0231520
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002527233.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SML4
description Kinase, putative OS=Ricinus communis GN=RCOM_0231520 PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004307_070 0.0 - - kinase, putative [Ricinus communis]
2 Hb_001143_140 0.0864824607 - - Aldehyde dehydrogenase, putative [Ricinus communis]
3 Hb_000347_420 0.1001514028 - - hypothetical protein JCGZ_24696 [Jatropha curcas]
4 Hb_006355_070 0.1058075933 transcription factor TF Family: bHLH Phytochrome-interacting factor, putative [Ricinus communis]
5 Hb_000095_070 0.1136218128 - - conserved hypothetical protein [Ricinus communis]
6 Hb_009641_040 0.116379028 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
7 Hb_000994_100 0.119539179 - - RALFL33, putative [Ricinus communis]
8 Hb_002814_050 0.1222618608 - - PREDICTED: sugar carrier protein A [Jatropha curcas]
9 Hb_000245_100 0.1273514601 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
10 Hb_029260_010 0.1290345416 - - nitrate transporter, putative [Ricinus communis]
11 Hb_060198_010 0.1309275112 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
12 Hb_001607_070 0.1309598767 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
13 Hb_000597_080 0.1336923169 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
14 Hb_026144_030 0.1344180888 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
15 Hb_008111_010 0.1345749845 - - hypothetical protein VITISV_021527 [Vitis vinifera]
16 Hb_012743_020 0.1365183278 - - serine/threonine protein phosphatase, putative [Ricinus communis]
17 Hb_138606_020 0.1386833067 - - Nitrate transporter2.5 [Theobroma cacao]
18 Hb_032260_130 0.1424104127 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
19 Hb_002308_060 0.1449516581 - - PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
20 Hb_007943_020 0.1451599985 - - transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004307_070 Hb_004307_070 Hb_001143_140 Hb_001143_140 Hb_004307_070--Hb_001143_140 Hb_000347_420 Hb_000347_420 Hb_004307_070--Hb_000347_420 Hb_006355_070 Hb_006355_070 Hb_004307_070--Hb_006355_070 Hb_000095_070 Hb_000095_070 Hb_004307_070--Hb_000095_070 Hb_009641_040 Hb_009641_040 Hb_004307_070--Hb_009641_040 Hb_000994_100 Hb_000994_100 Hb_004307_070--Hb_000994_100 Hb_012743_020 Hb_012743_020 Hb_001143_140--Hb_012743_020 Hb_026144_030 Hb_026144_030 Hb_001143_140--Hb_026144_030 Hb_002000_130 Hb_002000_130 Hb_001143_140--Hb_002000_130 Hb_003226_030 Hb_003226_030 Hb_001143_140--Hb_003226_030 Hb_000614_190 Hb_000614_190 Hb_001143_140--Hb_000614_190 Hb_007943_020 Hb_007943_020 Hb_000347_420--Hb_007943_020 Hb_029260_010 Hb_029260_010 Hb_000347_420--Hb_029260_010 Hb_138606_020 Hb_138606_020 Hb_000347_420--Hb_138606_020 Hb_000347_420--Hb_000095_070 Hb_000347_420--Hb_000994_100 Hb_038833_010 Hb_038833_010 Hb_006355_070--Hb_038833_010 Hb_000245_100 Hb_000245_100 Hb_006355_070--Hb_000245_100 Hb_003858_060 Hb_003858_060 Hb_006355_070--Hb_003858_060 Hb_002876_280 Hb_002876_280 Hb_006355_070--Hb_002876_280 Hb_001629_050 Hb_001629_050 Hb_006355_070--Hb_001629_050 Hb_002814_050 Hb_002814_050 Hb_000095_070--Hb_002814_050 Hb_060198_010 Hb_060198_010 Hb_000095_070--Hb_060198_010 Hb_001728_130 Hb_001728_130 Hb_000095_070--Hb_001728_130 Hb_000959_120 Hb_000959_120 Hb_000095_070--Hb_000959_120 Hb_014967_020 Hb_014967_020 Hb_009641_040--Hb_014967_020 Hb_000258_210 Hb_000258_210 Hb_009641_040--Hb_000258_210 Hb_007237_080 Hb_007237_080 Hb_009641_040--Hb_007237_080 Hb_003894_180 Hb_003894_180 Hb_009641_040--Hb_003894_180 Hb_003633_170 Hb_003633_170 Hb_009641_040--Hb_003633_170 Hb_002970_070 Hb_002970_070 Hb_000994_100--Hb_002970_070 Hb_002042_160 Hb_002042_160 Hb_000994_100--Hb_002042_160 Hb_055529_010 Hb_055529_010 Hb_000994_100--Hb_055529_010 Hb_000994_100--Hb_029260_010 Hb_010417_090 Hb_010417_090 Hb_000994_100--Hb_010417_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0284019 0.00790715 0.0449861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0359671 0.0381875

CAGE analysis