Hb_004310_170

Information

Type -
Description -
Location Contig4310: 147119-149124
Sequence    

Annotation

kegg
ID cic:CICLE_v10022690mg
description hypothetical protein
nr
ID XP_012083713.1
description PREDICTED: protein mago nashi homolog [Jatropha curcas]
swissprot
ID O65806
description Protein mago nashi homolog OS=Euphorbia lagascae PE=2 SV=1
trembl
ID A0A067K9B5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14641 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein mago nashi homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004310_170 0.0 - - PREDICTED: protein mago nashi homolog [Jatropha curcas]
2 Hb_000836_480 0.1320767759 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
3 Hb_001597_110 0.1362477952 - - -
4 Hb_006573_250 0.1417364201 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
5 Hb_099157_010 0.1418939916 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
6 Hb_006916_020 0.1493907802 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
7 Hb_000653_010 0.1565979113 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
8 Hb_146930_010 0.1582716689 - - -
9 Hb_011671_420 0.1584576677 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
10 Hb_000645_250 0.1589010307 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
11 Hb_033622_020 0.1599748875 - - lipid binding protein, putative [Ricinus communis]
12 Hb_008376_020 0.1609571588 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
13 Hb_001218_070 0.1626295059 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
14 Hb_003640_010 0.1628396791 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
15 Hb_004128_090 0.163564798 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
16 Hb_000847_120 0.16646954 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
17 Hb_001545_270 0.1673158027 - - laccase, putative [Ricinus communis]
18 Hb_000457_130 0.1685837177 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
19 Hb_004010_090 0.1690882549 - - ATP binding protein, putative [Ricinus communis]
20 Hb_007130_010 0.1714028149 - - -

Gene co-expression network

sample Hb_004310_170 Hb_004310_170 Hb_000836_480 Hb_000836_480 Hb_004310_170--Hb_000836_480 Hb_001597_110 Hb_001597_110 Hb_004310_170--Hb_001597_110 Hb_006573_250 Hb_006573_250 Hb_004310_170--Hb_006573_250 Hb_099157_010 Hb_099157_010 Hb_004310_170--Hb_099157_010 Hb_006916_020 Hb_006916_020 Hb_004310_170--Hb_006916_020 Hb_000653_010 Hb_000653_010 Hb_004310_170--Hb_000653_010 Hb_000836_480--Hb_000653_010 Hb_008066_060 Hb_008066_060 Hb_000836_480--Hb_008066_060 Hb_003398_090 Hb_003398_090 Hb_000836_480--Hb_003398_090 Hb_015978_010 Hb_015978_010 Hb_000836_480--Hb_015978_010 Hb_001545_270 Hb_001545_270 Hb_000836_480--Hb_001545_270 Hb_074892_010 Hb_074892_010 Hb_001597_110--Hb_074892_010 Hb_033622_020 Hb_033622_020 Hb_001597_110--Hb_033622_020 Hb_000380_130 Hb_000380_130 Hb_001597_110--Hb_000380_130 Hb_001597_110--Hb_006573_250 Hb_001218_070 Hb_001218_070 Hb_001597_110--Hb_001218_070 Hb_000457_130 Hb_000457_130 Hb_001597_110--Hb_000457_130 Hb_178703_010 Hb_178703_010 Hb_006573_250--Hb_178703_010 Hb_001004_130 Hb_001004_130 Hb_006573_250--Hb_001004_130 Hb_032223_020 Hb_032223_020 Hb_006573_250--Hb_032223_020 Hb_008376_020 Hb_008376_020 Hb_006573_250--Hb_008376_020 Hb_032631_080 Hb_032631_080 Hb_006573_250--Hb_032631_080 Hb_000000_200 Hb_000000_200 Hb_099157_010--Hb_000000_200 Hb_000609_020 Hb_000609_020 Hb_099157_010--Hb_000609_020 Hb_099157_010--Hb_008376_020 Hb_000847_120 Hb_000847_120 Hb_099157_010--Hb_000847_120 Hb_000645_250 Hb_000645_250 Hb_099157_010--Hb_000645_250 Hb_000836_260 Hb_000836_260 Hb_099157_010--Hb_000836_260 Hb_000753_180 Hb_000753_180 Hb_006916_020--Hb_000753_180 Hb_004128_090 Hb_004128_090 Hb_006916_020--Hb_004128_090 Hb_006916_020--Hb_001004_130 Hb_004010_090 Hb_004010_090 Hb_006916_020--Hb_004010_090 Hb_004586_110 Hb_004586_110 Hb_006916_020--Hb_004586_110 Hb_001300_140 Hb_001300_140 Hb_006916_020--Hb_001300_140 Hb_000653_010--Hb_008066_060 Hb_130563_010 Hb_130563_010 Hb_000653_010--Hb_130563_010 Hb_012753_190 Hb_012753_190 Hb_000653_010--Hb_012753_190 Hb_008226_020 Hb_008226_020 Hb_000653_010--Hb_008226_020 Hb_000138_020 Hb_000138_020 Hb_000653_010--Hb_000138_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.899643 2.13654 3.26247 0.025397 0.135448
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.195719 0.355956 13.8748 5.33523

CAGE analysis